Salvelinus sp. IW2-2015 (Arctic char): 111952171
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Entry
111952171 CDS
T05762
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111952171
Transcription factors [BR:
salp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
111952171
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
111952171
NCBI-ProteinID:
XP_023826482
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Position
LG26:complement(39105417..39124034)
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AA seq
631 aa
AA seq
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MNICDDLMADQRMDITSTMNEFMSPSSSDLISSSVNTPGMDYTRKRKGSTSDYQIDGFSF
NDSSVDTDKDKLRECGDHQGRIKNAREAHSQIEKRRRDKMNCFIDELAALVPTCNVMSRK
LDKLTVLRMAVQHMKTLKGAANPYTEANYKPSFLSDDELKHLILRAADGFLFVVGCDRGK
ILFVSESVYKILNYCQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPV
KTDITPGPSRLCSGARRSFFCRMKCNRPYVKTEDKDFPSTCSKKKADRKSFCTIHSTGYL
KSWPPTKMGLDDDNEPDNEGCNLSCLVAIGRLHPHIVPQPSHEDIRVKPTDYVSRHAIDG
KFVFVDQRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTNCYKFKI
KDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVSCSMLDGADSSYPQSAVSPTASMDSVL
TSEGGGRRALQTVPGIPGGTRAGAGKIGRMIAEEVMETQRTRGSNPSSCGSSPLNISTPP
DCSPGGKRIQNGTPDLPSAGTLPGGPDTIGYPYSNQSIMSDNSHLSIDIMDEPSSSSPSN
DEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaacatttgtgatgatctaatggcagaccaaagaatggacattacctctacaatgaat
gagttcatgtcccccagctccagcgacctgatcagcagctccgtcaacaccccaggcatg
gactacacccgcaagagaaagggcagcacctccgactaccaaattgatggattttctttc
aacgatagcagtgtggatacagacaaggataaacttagggagtgtggtgatcaccagggc
cggataaaaaatgccagggaggcacacagtcagattgagaagcggcgcagggacaagatg
aactgcttcatagacgagctggcggcactagtccctacctgcaacgttatgtcccgcaag
ctggacaaactcacggtcctacgcatggctgtccagcatatgaagacattaaaaggagca
gcaaacccttacacagaggcgaactacaagccgtctttcctgtccgatgatgaactgaag
cacttaatattgagggctgctgacggctttctgtttgttgttggatgtgatcgtgggaag
atcctttttgtctcggagtcagtttacaagatcctcaactattgccagaatgacctaatt
ggccagagtctgtttgattacctgcatcctaaagacatcgccaaagtcaaggagcaactg
tcgtcatcggatacagcacctcgggagcggctcattgatgccaaaaccggtctaccagtt
aagacagacatcacccctgggccatctcgactgtgctccggggccagacgctcgttcttc
tgccgaatgaagtgtaaccggccctacgtcaaaacagaggacaaggacttcccctccacc
tgctccaaaaagaaagccgaccgcaagagcttctgcacgatccacagtactggctacctg
aagagctggccgcccaccaagatgggcctggacgatgacaacgagcccgacaatgagggc
tgtaacctcagctgcctggtggccatcggccggctgcatccccacatcgtcccccagccc
tcccacgaggacatccgcgtcaaacccaccgactacgtctcccgccacgccatcgatggg
aagtttgtctttgttgaccagagggccacagccattcttgcatacttaccccaggagctt
cttggcacctctttctatgagtatttccatcaggatgatattggccacctggcagaatgt
cacagacaagtgcttcagatgagagaaaagatcaacacaaactgttataagttcaagatt
aaagatggctccttcatcactctgcgaagccgctggttcagtttcatgaatccctggacc
aaagaggtggagtacatcgtctccacaaacacagtggtctcgtgcagtatgctggatggt
gcagactccagctatcctcagtctgccgtctctcccactgcctctatggacagtgtgctg
acgtcagaaggtggagggagacgggcccttcagacggtgccaggcatccccgggggaaca
cgtgcaggtgccggtaagatcggtcgcatgatcgcagaggaggtgatggagactcagagg
acccgaggctcgaacccctccagctgtggctctagccccctgaacatcagcacccctcca
gactgctctccagggggcaagcgaattcaaaatggaacgccagaccttccgtcggcaggg
acactaccaggaggacccgacaccattggatacccatactccaaccagtctattatgagt
gacaactcgcacctcagcattgacatcatggacgaaccaagctccagcagccccagtaac
gacgaggcagccatggctgtgatcatgagtctcctagaggctgatgcaggcctcggtggc
cctgtagacttcagtgacttaccctggcccttgtga
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