Salvelinus sp. IW2-2015 (Arctic char): 111952175
Help
Entry
111952175 CDS
T05762
Symbol
smpd3
Name
(RefSeq) sphingomyelin phosphodiesterase 3
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00600
Sphingolipid metabolism
salp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
111952175 (smpd3)
Enzymes [BR:
salp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
111952175 (smpd3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
nSMase_N
Exo_endo_phos
DUF4131
Motif
Other DBs
NCBI-GeneID:
111952175
NCBI-ProteinID:
XP_023826495
LinkDB
All DBs
Position
LG26:17163330..17219002
Genome browser
AA seq
666 aa
AA seq
DB search
MVLHTSPYSSAFLRCLSSLSWGFIFPCYWLLDRLLSSCVATSLEKRRRSQDPCSFVTLYV
LVSTPLYLLLLLASLPFALLGFLLWATLQAARHPYLYTHRRPDKHQAEQGGVASLADWRP
QGRSFCFGSSNVCLLPDSLARFNNLSETQRRAREVGKRIRNGASRPQIKIYIDSPTNTSI
SATSFSSLVTGFRRTSSLGQRPDNTAEAETEPVTDCPIHTAGSDCPLHTTGPNCPIHSTG
DQGSSDCPVHVAGGENTPECPLHTAGSQNSSDCPLHTTGAQNSPDCPMHASGVQISISAP
EPDPPEAGTGNHQREGDAESLTGGVSSNNTLSHRTSMFKKHTGRKRRQGDDGFDHEISAF
FPANLDFLCLQEVFDHRAMSRLRHQLHHYFPYILSDVGRYAWKGCCSHFKFLNSGXMLAS
RYPILDAHYECYPNGRGEDALAAKGVLFVKVQVGTSHQEQRVVGYLTCTHLHAIEGDAAV
RCEQLDLLLAWGAEFRKMTSRPSEEKGLEDQVAFDVVLGDLNFDNCSSEDKLEQQHAVFT
QYKDPCRLGPGEDKPWALGTLLDTSGLYDEEVSSPESLQKVMENEEGRKEYLVFPTNKNQ
CPNQKGRKIPLKGNGRRIDYILYREEVQQDWKVDIEEFSFITQLAGLTDHLSVAMRLAVS
TGEEEP
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggtcctccacacctctccctactctagtgccttcctacggtgcctcagcagcctgtca
tggggcttcatcttcccctgctactggctgctggaccgcctgctgtcctcctgcgtggca
acctctctggagaagcgtcggcgctcccaggacccctgttccttcgtgacgctgtatgtg
ctggtgtccaccccgctctacctgttgctcctcctggcctcgctgcccttcgctctgctg
ggcttcctgctgtgggctaccctgcaggcggcccgccatccctatctctacacccaccgc
cgcccagacaagcaccaggctgagcaggggggtgtggcgtcactggccgactggagaccg
cagggccgcagcttctgcttcggcagttccaacgtgtgcctactgccagactccctggca
cgcttcaacaacctgtctgagacccagcgccgtgcacgcgaggtgggcaagcgcatccgt
aacggggccagcaggccgcagatcaagatatacatcgactcccccaccaacacctccatc
agcgccacctccttcagcagcctggtcacagggttccgacggacatcctccctgggccag
cggcccgacaacacagccgaggccgagaccgaacccgtaaccgactgcccaatacacact
gcaggttcagactgcccattacacaccacaggtccaaactgccccatacactcaacaggg
gaccagggctcctcagattgtcccgtccatgtagctggtggagagaacacaccagagtgc
ccccttcacactgctggttctcagaacagctctgactgtccactgcacaccacaggggcc
cagaactccccagactgccccatgcatgcctcgggggtccagatcagtatcagtgcccca
gagccagaccccccagaggccgggacagggaatcaccaaagggaaggtgatgcagagagc
ctgacagggggggtgtcttctaacaacaccctgtcccaccgcacttccatgttcaagaag
cacaccggtcgcaagcggcgccarggtgacgacggattcgaccatgagatctctgccttc
ttccctgccaacctggacttcctgtgtctgcaggaagtgtttgaccaccgggccatgtcc
aggctgaggcaccagctgcaccactacttcccctacatcctgagtgatgtgggccgctac
gcctggaagggctgctgctcccacttcaagttcctgaacagcggcrtcatgctggccagc
cgctatcccatactggatgcccactacgagtgctaccccaacgggcgaggggaagacgcc
cttgcagccaaaggagtcctctttgtcaaggtgcaggtaggcacctcccatcaggagcaa
agagttgtgggatatctcacctgcacacatctgcatgccattgaaggagatgcagctgtg
cgttgtgagcagttggatctgctcttggcgtggggggcggagttccgcaagatgacgtcc
cgcccctcggaggagaagggtctggaagaccaggtggcctttgatgttgtcctcggcgac
ctcaattttgacaactgctcctcagaggataaactggagcagcagcatgccgtcttcacc
cagtacaaggacccatgtcgcctggggccaggggaggacaagccttgggctctgggtaca
ctactggacaccagtgggctttatgacgaggaggtcagttcaccagagagtttacaaaaa
gtgatggagaatgaggaggggaggaaggaatacttggtgttccccaccaataaaaaccaa
tgtcctaatcagaagggcagaaaaatccccctgaaaggcaatgggaggaggatcgactac
atcctttacagagaggaggtgcagcaggactggaaagtggacattgaagagttcagcttc
atcacccagctagccggcctcactgaccacctgtctgtggccatgcgtctggctgtgtcc
actggagaggaggaaccttag
DBGET
integrated database retrieval system
