KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111952177
Entry
111952177         CDS       T05762                                 
Name
(RefSeq) claudin-1
  KO
K06087  claudin
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03272  Virion - Hepatitis viruses
salp04382  Cornified envelope formation
salp04514  Cell adhesion molecule (CAM) interaction
salp04530  Tight junction
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    111952177
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    111952177
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    111952177
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    111952177
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:salp03037]
    111952177
   04147 Exosome [BR:salp04147]
    111952177
Cilium and associated proteins [BR:salp03037]
 Other cilia and associated proteins
  Stereociliary proteins
   111952177
Exosome [BR:salp04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   111952177
  Exosomal proteins of colorectal cancer cells
   111952177
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 TMEM37 TMEM_230_134 Sugar_transport DUF202 TMEM61 DUF7937 DUF1218 DUF6594 L6_membrane
Other DBs
NCBI-GeneID: 111952177
NCBI-ProteinID: XP_023826497
LinkDB
Position
LG26:2753905..2756954
AA seq 217 aa
MTSSAVQLPGYALALIGLVGSMIATTMVEWKRHSYTESTVTSKETYLGLWMSCTVDVTRH
TMCVNYKSLFHLPAEILTTRVVMILSVMLSAVGVLVATLGMRCTRCLEEDEKQKDRVAIV
GGFLFVIAGVLAISVTSWFANAIIRSFEFSDSPTSLHNRFEFGNAVLVSWGAGICSVVGG
FLLGCRYLWSCPQGSRSVSSLTQPKVIPGTRPGTHYV
NT seq 654 nt   +upstreamnt  +downstreamnt
atgacgagctctgcggttcaacttcccggttatgctcttgctttgatcggtcttgttggc
tcaatgattgccaccactatggtggagtggaaaaggcactcttacacggagagcacggta
acatcaaaggaaacttacctggggttatggatgtcatgcacagtcgacgtcacaagacac
acgatgtgcgtcaattacaagtcactctttcacctgccagcggagattctgaccacccga
gtggtgatgatcctcagtgtcatgttgtcagccgttggggtgctggtagccacgctgggg
atgagatgcacccgatgcctggaggaggatgaaaagcagaaggacagagtagccattgtt
ggaggattcctcttcgtcatcgcaggtgttctggccatatcagtaacctcctggtttgcc
aacgccatcatccggtcctttgaattctcagactcacctacttccttacataacaggttt
gagtttggcaacgctgtgctggtgagctggggtgcaggtatctgctctgtggtgggcgga
tttctcctgggctgcaggtatctgtggagttgtccccagggctcacgctcagtctcatcc
ttracccaacccaaagtaatccctggcacccggcctggcacccactatgtttaa

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