Salvelinus sp. IW2-2015 (Arctic char): 111952400
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Entry
111952400 CDS
T05762
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04814
Motor proteins
salp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
111952400
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111952400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111952400
03036 Chromosome and associated proteins [BR:
salp03036
]
111952400
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
salp04812
]
111952400
Membrane trafficking [BR:
salp04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
111952400
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
111952400
Cytoskeleton proteins [BR:
salp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
111952400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
111952400
NCBI-ProteinID:
XP_023826811
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All DBs
Position
LG3:21431269..21461957
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AA seq
1256 aa
AA seq
DB search
MSADGGGKPAKVGSVVEVIGKGQRGTVAYVGATLFATGKWVGVILDEPKGKNDGTVQGKR
YFQCDENCGIFVRQSQIQLVEDGSSATSPDTPEAATAKFLPKQKDIPETPKSVKQMHIPK
KFVTRRSTKTPRVLATPASGLSSSLSREDVSEGSLSSKGALGAPVVPLPSGTPATPGAPP
PATPSKAEPPVSKQEEESLRGQVKDLEEKLETLKMKRAEDKVKLKELEKYKIQLEQLQEW
KTKMQEQQADLQKQLKEAKKDAREALESKDRYMEEMSDTADAIEMATLDKEMAEERSESL
QVEVEALKEKMEELTMDLEIIKHEVEEKGSDGAASSYHVKQLEEQNSRLKEALVRMRDLS
SSEKQEHVKLQKQMEKKNGELETLRTQKEKLQEEMKQAEATIDELKEQVDAALGAEEMVE
TLTERNLDLEEKVXELRETVTDLEAINEMNDELQENSRETEMELREQLDLNGARVREAQK
RVEAAQETVADYQQTINKYRELTTSLQDTNRELTVAQNANAEQVQQPPAELFDFKIKFAE
TKAYAKAIEMELRKMEVGQANRQVSLLTSFMPDSFLRHGGDHDCILVLLLIPRLICKAEL
ISKQAQEKFDLNGNPVERTGMKMRGPPGEQLSFASGLVYSLTLLQATLHKYEQSLNCCSV
EVYKRMGTLYSEMSVHERSLDFFIDLLHKDQLDETVHVEPLTKAIKYYQQLYSIHLAEQT
EDCTVQLADHIKFIQSALDCMGAEVVRLRAFLQPGQEGADLNILLKDLDTSCSDIKQFCK
KIRRRMPGTDVPGVPAALAFGAPVSETLTDCRRQLTRVVAVLQEVAAAGAQMVAPLGEQE
GLNTLKLEDVAFKAVEQVYGSHGLNPHECLRQSCSSVISTMNKMATAMQEGEYDAERPQG
MTPPVEARAVALRAEITDAEGLGVKLEDRDTVIKELKKSLKIKGEELSEAHVRLSLLEKK
LDTSTKDADERVEKIQTKLDETLALLKKKEKEFEETMDALQADIDQLEAEKAELKQRLSN
QSKVTIEGLRAPPASGIASIISGTAGAGVAPGAGGLSGPMQVVDSPLLRQQVETQRLGIK
HLKNENNRLKAEKMRAQLASLPPLHVPKLPLREASISPPAEGPLHGALYRKTDQLLGTLL
KMSAAVKVVDITGKTPVSASAQLLDQTARLQSLSDALDKLKGEVSEHVVSQQSGAKVSSD
FATFPISSFVKAKEEKQGGTVFIGRVAIPCAKGQEQVHRLVLSQQHLQQVHRLLMT
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggacgggggcggcaagcctgccaaggtgggctcggtggtggaggtgatcggt
aagggtcagcgtggcacggtggcttacgtgggcgccacgctctttgccactggcaagtgg
gtgggcgtgatcctggacgagcccaagggcaagaacgacggcacggtccaggggaagaga
tactttcaatgtgatgagaactgtggtatcttcgtgcgccagtcccagatccagctagtg
gaagatggatccagtgccacctctccagacaccccagaggcggccactgccaagttcctg
cccaagcagaaagacattcctgagactccgaaatcagtcaaacagatgcacattcccaag
aagttcgtaacccgccgtagtaccaagaccccccgagtcttagccaccccggcctctggt
ctgtccagctctctttccagggaggatgtcagtgagggcagcctgtcttccaagggtgca
ctgggggctcccgtcgtccccctgcccagcggcacccccgccacgcccggagcgcctccc
cctgccacccctagcaaggctgagcctcccgtatctaagcaggaggaggagtctttgcga
ggtcaggtgaaggatctagaggagaaactggagaccctgaagatgaagcgagcagaggac
aaggtcaagctgaaggagctggagaagtacaagatccagctggagcagctgcaggaatgg
aagaccaagatgcaggagcagcaggccgacctgcagaaacaactcaaagaggccaagaag
gatgctcgggaggccctggagtctaaggaccgctacatggaggagatgtcagacacggcg
gacgccatcgagatggccacactggacaaggagatggccgaggagcggtcggagagcttg
caggtggaggtggaggcactgaaggagaagatggaggagctcactatggacctggagatc
atcaaacacgaggtcgaggagaaaggttctgatggagctgcctccagttaccatgtcaag
cagctggaggagcagaacagcagactgaaagaggctctggtcaggatgcgtgacctgtct
tcctctgagaagcaggagcatgtgaagctccagaagcagatggagaagaagaatggagag
ctggagactctgaggacccagaaggagaagctacaggaggagatgaagcaggctgaggcc
accattgatgagctgaaggagcaggttgatgctgctctcggggcagaggagatggtggag
actctgactgagaggaatctggacctggaggagaaagtckgagagctcagagagactgtc
acagacctggaagcgatcaacgagatgaatgacgagctgcaggagaacagcagggagacg
gagatggagctgagggagcagctggacctgaacggggccagggtgagagaggcccagaag
agggtggaggccgctcaggagaccgtggctgactatcagcagaccatcaacaagtatcgc
gagctcaccaccagcctacaggataccaacagggagctgaccgttgctcagaatgccaat
gcagagcaggtccaacagcctcctgctgagctgtttgacttcaagatcaagtttgctgag
accaaggcctacgccaaggccatcgagatggagctgaggaagatggaggtgggccaggcc
aacagacaggtgtctctcctcacctccttcatgcccgactccttcctgcgtcatggagga
gaccacgactgtattctggtgctcttgctcataccaagactcatttgcaaggctgagttg
atcagcaagcaggcccaggagaagtttgatctgaatggtaacccagtggagaggactggg
atgaagatgagaggaccacctggagaacaactcagctttgcctctggactggtgtattct
ctaaccctgctacaggccacactgcacaaatatgaacaatctctgaactgctgcagtgtg
gaggtgtataagcggatggggactctctactcagagatgagtgtccatgagcgttcccta
gacttctttatagacctgctgcacaaagaccagctggatgagactgtacacgtggagcct
ctcaccaaggccatcaagtactaccagcaactgtacagcatccacctggcggagcagact
gaagattgcaccgtgcagctggctgatcacatcaagttcatccagagtgcgttggactgt
atgggtgctgaggtggtgcgtctcagggccttcctgcagccggggcaagagggggctgac
ctgaacatcctgctgaaggacctagacacatcctgcagcgacatcaaacagttctgcaag
aagatcagacgcaggatgccagggaccgacgtgccaggggtgcctgccgctctggccttt
ggcgcaccggtgtcagagactctaacggactgcaggcgtcagctgacgcgggtggttgcc
gtgctacaggaggtagctgcggcgggggcgcagatggtcgcccctctaggggaacaggag
gggctcaacaccctcaaactggaggacgtggccttcaaggctgttgaacaggtgtatggg
tcccatggcctgaacccccatgagtgtctgcgtcagtcctgcagctctgtcatctccacc
atgaacaagatggctaccgccatgcaggagggagagtatgacgccgagcgaccacaggga
atgactcccccggtagaggctcgtgcagtggccctcagggcagagatcactgacgcagag
ggtctgggagtcaaactggaggacagagacaccgtcatcaaggagctcaagaagtccctc
aagatcaagggagaggagttgagtgaggcccacgtgcgtctcagcctgctagagaagaag
ctggatacgtccactaaagatgcagacgaacgcgtggagaagatccagaccaaactggat
gagaccctcgccctgctgaagaagaaagagaaggagtttgaggagaccatggacgccctg
caggcagacatcgaccagctggaggcagagaaagcggagctgaagcagcgtctctccaac
cagtcaaaggtgaccatcgagggcctcagggccccgcctgcctctggcatcgcatccatc
atctcaggaaccgccggagcgggtgttgccccaggggcagggggcctgtctgggccgatg
caggtggtggactcccctctcctccgtcagcaggtggagacccagagactgggcatcaaa
cacctgaagaacgagaacaacagactgaaggcagagaagatgagagcccagttagcctcc
ctccctcccctccacgtccccaagcttcctctgagagaggcctccatctctccccctgct
gaggggcctctccacggggctctctacaggaagacagaccagctcctggggaccctgctc
aagatgagcgccgccgttaaggtggtcgacatcaccgggaagactccagtgagtgcgagt
gctcagctcctggaccagacagctcgactgcagtctctgagtgacgctctggacaaactg
aagggtgaagtgtcagagcatgtggtttctcagcagtctggggcgaaggtctcctctgac
tttgccaccttccccatttcctccttcgtcaaggccaaggaggagaagcaggggggtacg
gtgttcatagggcgcgtggccatcccatgtgccaagggccaggagcaggtgcaccgtctc
gtcctatcacagcagcacctgcagcaagtgcaccgcctcctcatgacctaa
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