Salvelinus sp. IW2-2015 (Arctic char): 111952417
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Entry
111952417 CDS
T05762
Name
(RefSeq) S phase cyclin A-associated protein in the endoplasmic reticulum isoform X1
KO
K24869
S phase cyclin A-associated protein in the endoplasmic reticulum
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
salp03037
]
111952417
Cilium and associated proteins [BR:
salp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
111952417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCAPER_N
zf-met
Motif
Other DBs
NCBI-GeneID:
111952417
NCBI-ProteinID:
XP_023826824
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All DBs
Position
LG26:complement(25017669..25128800)
Genome browser
AA seq
1481 aa
AA seq
DB search
MSKDSRNDGRRRGQHRFGIRIGQGGDGRERSGSNSSGSSHGGGKSRNTPITVALKASFQR
SNSHDKVRKIVAEEGRAARNLIAWSVPLENKEXEGKSKTHTNANLRNQRINSGLHRNKKQ
NTGLDNKSTAGALLDKGAEKSPTKAKQPRKVDLRARYWAFLFDNLRRAVDEIYVTCESDQ
SVVECKEVLMMLDNYVRDFKALIDWIQLQEKLEKTDAQNRPTSLAWEVRKMSPGRHVMPS
PSSDRIVHSPSARRALNFGGPPPTLAVARLSHTGPSWADRVKSSQSLPVPSQVNNYPAEK
PGKKDSEGWETVQRGRPARPRSAAIVVKVSPVLAHISPKDDINKENQQPPGRPCPLDKDE
GQCEQPIPEEPVPLEEMTGDSEKGHMMEPPSDSAQDSVQCVNAPCEDAPPPIAAPTSTLY
LTQDPDPTIFPALSLPVPALALPPSLDPAQTDGPCALGDKGTAGATSQGMATSAPGPAEA
PMAAVKLESVLDPKELSTPQSMAEVLAKKEELADRLEKANEEAIASAIAEEEQLTREIQA
ENNDLETDNESDFSASIGSGGGFNMDWSDMLADYDDSPLSAAREPWRQSTSWGDIVEEEP
SRPPGHGIHMHEKLSSPSRKRTIAESKKKHEEKQLKAQQLRDKLRDEKTHKLQKLLEREK
EVRKWKEELLDQRRRMMEEKLLHAEFKRELQLQAIVKKAQEEEAKVNEIAFINTLEAQNK
RHDVLAKLNEYEQRLNELQEERGRRQEEKQARDEAVQERKRALEAERQARVEELLMRRKE
QEARIEQQKQEKERAREDAARERARDREERLAALSAAQQEAMEELQKKIQMKHDESSRRH
MEQIEQRKEKAAELGSGRHANTDYAPKLTPYERKKQCSLCNVVITTEVHLYSHTKGKRHQ
QAVRDSSSIQGRELSDEEVEHLSLKKYIVDIVTDNTVSSESGKDGEERQKARKKAKKLRT
RMNSRAKEYETSMEAKTVPDSPYKAKLQRLVKDLVKQLQGQDSGQWANTRVSGLDRTLGE
ISRILEKQNNEDQVAFQVGGGLSTLEQILQVVTATSTPTAVSRIPIKSLCAAINTYYLAC
SRCHLNCTYVIFSNKIAFLMDLLLHQLTLFVPDEDKTIFGRSVNKQVFEGLTTGLLHTSA
TVLSLLRPYVPDCGRGDAPRIMSPDTKTKTSPIESFNARAQDLISYVVNMGLIDKLYSCF
LSVQGPVDESPKMSAFLQQATALLHAMCKLCFTVTGRSPSIFDNKRTDLTGLTALLQSTD
LVGVVHTLYCILLHSSALPEPAAQGPQEPYAPGVIQVALTGLRFLNSFALLDLSAFQTVL
GAEGLSLAFRHIVSSLLWYCSQHSSEELLQEVIICVGYFTVNHPDNQVIVQSGRQPSVLQ
KLCQLPFQYFSHPRLIKVLFPSLISACYNNPQNKVILQQEMSCMLLATFIQDGASSENHP
DNRMQQGDRVSQPLDYCELSNRFPRDQWDSALQFFLKKQED
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagacagtcgcaacgatggacgacggcgtggccagcaccgattcggtattaga
attggacaaggcggggacgggagggagaggtctggcagcaacagctcagggtcctcgcat
ggaggaggaaaaagcaggaatactcccataaccgttgccttgaaggcgtcctttcagcgg
tcaaacagccatgacaaggtgaggaagattgtggcagaagagggccgtgctgcgagaaat
ctcattgcctggagtgttcctctggagaacaaagaggrggaagggaagtccaagactcac
acaaacgccaatttgaggaatcaaagaattaactctggactgcataggaataagaaacag
aatacaggcctggacaacaagagcacagccggggccttgcttgacaagggagcagagaag
agtcccaccaaagccaagcagccgcgcaaggtggacctgcgagcacgatactgggccttc
ctcttcgacaacctgcggcgggcagtggatgagatctatgtcacctgtgaatctgaccag
agtgtggtggagtgcaaggaggtgctgatgatgttggacaactatgtgcgggactttaaa
gctctgattgactggatccagctgcaggagaagttggagaaaacagatgcccagaacaga
cccacgtctttggcttgggaagtgcgtaagatgtccccaggtcgtcatgtgatgcccagc
ccctcatctgacaggattgtccactcacctagtgctcgccgcgccctaaactttggtggt
cctccacccacactggccgtagctcgtctgtcccacacgggccccagctgggctgaccgg
gtcaagtcctcccagtcccttcctgtccccagccaagtcaacaactatcccgcggagaaa
ccaggtaagaaggactctgagggctgggagacagtccagcgcgggcgtccggcacggcct
cgctctgccgccatcgtagtcaaggtcagcccggtgctggcccacatcagccctaaagat
gatatcaacaaggagaaccagcagccccctggcaggccctgccccctggacaaagacgag
ggtcagtgtgaacaaccaatcccagaggagcccgtccccctggaggagatgacaggagac
tcagagaagggtcacatgatggagcccccatcagacagtgcgcaagactcggtgcagtgt
gtcaacgcaccctgtgaggatgcgcctccccccatagcagccccaacttctaccctttac
cttacccaggacccagaccctacgatattcccagccctatccctaccagtccctgcccta
gccctccctccgtccctagacccggcccagacggacgggccctgtgctctgggggataag
gggactgcgggggccacgtcacagggcatggcaacatctgctccaggaccggctgaggct
cccatggcagcggtgaaactggagagtgtgctggaccccaaagagctttccactccccag
tccatggcagaggtcctggcaaagaaggaggagctggctgaccgcctggagaaggccaat
gaggaggctatcgccagygccatcgctgaagaggaacagctgaccagagagatccaggct
gagaacaatgacctggagactgacaatgagagtgacttctctgccagcattggcagtgga
ggtggattcaacatggattggagtgacatgctagccgactatgacgactcacctctctct
gcagcgcgggagccgtggcgtcagagcacctcctggggggacatcgtggaggaggagcct
tccagaccacctggccatggaatccacatgcacgagaaactgtcctccccatctcgcaaa
agaaccatcgcagagtctaagaaaaaacatgaagagaagcagctgaaggcccagcagctc
cgagataaactgcgagatgagaagacccacaaactgcagaagctcctggagagggagaag
gaggtcaggaaatggaaggaggagttgttggaccagcggcggaggatgatggaggagaag
ttactccatgcagagttcaagcgggagctgcagctccaggccatagtgaagaaggctcag
gaggaggaggccaaggtgaatgagatagcgttcatcaacactctggaagctcagaacaag
aggcacgatgtgctggccaagctgaacgagtacgagcaacgcctcaatgagctgcaggag
gagagaggcaggagacaggaggagaagcaggccagagacgaggctgtacaggagcgtaag
cgggctctggaggcagagcggcaggcacgggtggaggagctgcttatgaggaggaaggag
caggaggcacgcatcgagcagcagaagcaggagaaagagagggccagggaagacgctgca
cgagagagggccagagacagagaggagcgtctggctgccctcagcgctgctcaacaggag
gccatggaggaactgcagaagaagatccagatgaagcatgatgagagcagtcgcaggcac
atggagcagattgaacagaggaaggagaaggcagcagaactcgggagtggcagacatgcc
aacactgactatgcccccaaactgacaccgtatgagcgcaagaaacartgctccttgtgc
aatgttgtgatcaccacggaagtgcacctgtacagccacaccaagggcaagaggcaccag
caggccgtgagagacagcagcagcatccagggacgggagctctcagatgaggaagtggag
catctttctttaaagaagtacatagtggacattgtgacggacaacactgtctcctccgag
agtgggaaggatggagaggagaggcagaaggcacgcaagaaggcaaagaagctccgcaca
cgcatgaactccagggcaaaggagtatgagacgtcaatggaggcaaagacagtccctgac
tccccatacaaggccaagctccagcgtctggtgaaggacttggtcaagcagctccagggc
caggacagtggtcagtgggccaacaccagggtgtcaggcctggacagaaccctgggagag
atctcycgcatcctggagaaacagaacaatgaagatcaagtggcattccaggtgggaggg
ggactttctactctggaacagattctgcaggtagtcactgcaacctccacccctaccgca
gtctcacgcattccaatcaagtctctatgtgcggctataaacacctactatctggcatgc
tctcgctgccacctcaactgcacatatgttatcttcagcaacaagatagccttcctcatg
gacctgctgctacatcagcttacactgttcgtcccagatgaagacaagaccatatttggt
cgcagtgtgaacaagcaggtgtttgagggactgaccaccggcctgctgcataccagcgcc
actgtcctgagccttctccgtccctatgtccctgactgtggccgcggggacgcccctcgc
atcatgtcaccagacaccaagaccaagacctcccctatagagtccttcaacgcccgcgcc
caggacctcatcagctatgtggtaaacatgggtctgattgataagctgtacagctgcttc
ctgtctgtccagggcccggtggatgagagccccaagatgtctgccttcctccagcaggcc
accgctctgctgcacgccatgtgtaagctgtgcttcactgtgaccggccgctctcccagt
atattcgacaacaagcgtacagacctcacagggctgacggccctgctgcagtccacagac
ctggtgggtgtggtacacactctgtactgcatcctgctccacagctccgccctgcctgag
ccggctgcccagggcccacaggagccctacgccccaggggtcatccaggtggccctgacg
ggcctccgcttccttaacagcttcgccctgctcgacctgtctgccttccagactgttcta
ggtgccgaggggctgtcccttgctttccgccacatagtgagctccctgctgtggtactgc
tctcagcactcctctgaagagctgctacaggaagtcatcatctgtgtgggctacttcacc
gtcaaccaccctgacaaccaggtgatagtgcagtctggccgccagcccagcgtgctgcag
aaactgtgtcagctgcccttccagtacttcagccacccgcgcctcatcaaagtgctcttc
ccctcactcatctcagcctgctacaacaatccccagaacaaggttatcctgcagcaggag
atgagctgtatgctactggccaccttcatacaggacggtgcctcaagtgagaaccatcca
gacaacagaatgcaacaaggagacagagtctctcagccactggattactgtgagctgtcc
aaccgctttcccagagaccaatgggactcagcactgcagttcttcctcaagaagcaggag
gactaa
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