Salvelinus sp. IW2-2015 (Arctic char): 111952448
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Entry
111952448 CDS
T05762
Name
(RefSeq) rho family-interacting cell polarization regulator 1 isoform X1
KO
K24818
Rho family-interacting cell polarization regulator
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
salp03037
]
111952448
04990 Domain-containing proteins not elsewhere classified [BR:
salp04990
]
111952448
Cilium and associated proteins [BR:
salp03037
]
Other cilia and associated proteins
Stereociliary proteins
111952448
Domain-containing proteins not elsewhere classified [BR:
salp04990
]
Other domain-containing proteins
HEAT repeat domain-containing proteins
111952448
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PL48
HEAT_2
HR1
FAM92
DUF5955
Motif
Other DBs
NCBI-GeneID:
111952448
NCBI-ProteinID:
XP_023826887
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All DBs
Position
LG26:complement(21152181..21225203)
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AA seq
1180 aa
AA seq
DB search
MSISLRWFSLNPRNLLLVWVVNTERKPHIDKKMYSGFGGSPSRAVSTMSLSVRPSRRVIS
RSVTRSQSFAGVNSYDKPYRNLSVFSTPRVTRKPSRASRMFTLSAKSPPPKVPQPERLDE
VYEALKRGLQSYLQVHQIELDSLSRQMRESKRNSRLGFLYELDKQVKVVERFMRRLEFHL
SKIDELYEAYCMQHRLRDGANKMVKAYTVSQGSREARESLSEANKGYKEYTENMCMLESE
LENQLGEFHVKMKGLAGFARLCAGDTYEIFMKYGRQRWKLRGRMEINGKQVWDSEDMVFL
PLITEFLSIKVTELKSLANHVVVGNVSCETKDLFAALPRTVAVDINDLGTIKLSLEVTWN
PFDKDDQASAASTVNKPPTVNKRFSTYNQSPPDTPSLREQAFYTAPRSLSRSMMSPKHRW
SLLDVFRDTLAERLSQSCSCSDVSSVHLGSANMQTDNMLRRQEEMENGTAWSNSSESSDD
SSSPQLSLGLRHANKNLVQLEVQAAAPSIEISFAPRDSATSTPTRSAKPEDVQKEEPDTG
AAGKEEDSGKQAVPNGQTRYSRSLSHISENSADGVLMDRSTCESVEPSEATSLQSGISIN
DIEMEMPARAESASVPAETVVXGEPSEPLAPATVTGEESRPESRYSAGSIESDTGLEVVS
GAVSEVDPELQSSAPTRTDAVSQQGASLDLRADSQAQTQSTEEISYTAHRAVVVEAEKPG
PVVVASPTEGEKQQAVDSEVEEALSAVIASLDDYRGQFPELQVLEQELRLLEETLTGRTC
SCLSSVQSLAVETALGSFDFLNTSDLEDEEEEEDGEKGSVTDRPPEESAGEDECCEERCW
ESHSSGPVSTGCQALDHTLLVHLKNCSAQLLRLGTFGPLRCGEMYALDRLLREARVLELI
RRVAKETPGGATQPDEVVPQLEQCQGATLLWQQCTDDGSVYSTSTDAFLTTLATAYTNRL
PERGVSLADTVFLRLVERMLERRLPTRGGGVARDMLTLFQFWSYLEAEGVSELDTHIIEL
AEEVWLVQSLQSGDQEVLVKALKRPPESSLKREGLHAVSLLLRDPRGKVSASASSLLRSL
ADQPRHRERALVSCLELLENESVETRVCGCKALACLKAKESIDQLVYLCRSDKEDVRDAA
KQALLVLGEEGKLAHRHVEISLQEGVPRLFSPGSMASTAF
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgtctatctctttaaggtggttctcattaaacccaaggaaccttctcctggtctgggtg
gtcaacactgagaggaagccacatatcgataaaaagatgtacagtggatttggagggagt
ccctccagagctgtctccaccatgtccctttccgtgcgcccatcgcgccgagtcatctcc
agatccgtcactaggagccagtcctttgccggggtcaactcctacgataagccctacagg
aacctgtcggtgttcagcaccccgagggtcaccaggaagccctccagagccagtaggatg
ttcaccctctctgccaaatccccaccgcccaaggtgccccagccagagaggctggatgag
gtctacgaggctctgaagagaggcctgcagtcttacctgcaggtgcaccagatagagctg
gacagcctgagccgacaaatgagggaatccaagaggaactctcgtctggggtttctctat
gagctggataagcaagtgaaggtggttgagaggtttatgcgacggcttgagttccatctc
agcaagattgacgagctgtatgaggcctactgtatgcagcaccggctgagggatggggcc
aataagatggtgaaggcctacacagtctcccagggcagccgcgaggccagagagagcctg
tctgaggccaacaaaggctacaaagagtacacagagaacatgtgcatgctggagagcgag
ctggaaaaccagctgggggagttccatgttaagatgaagggtctagcagggtttgcacgg
ctttgtgctggggacacgtatgagatctttatgaaatatgggcggcagcgctggaagctg
aggggaaggatggagatcaatggcaagcaggtgtgggacagcgaggacatggtctttctg
cctctcatcacagagttcctatcaataaaggtgacagagctgaagagcctggccaatcat
gtggtggtggggaacgtgtcatgtgagaccaaagacctctttgctgctctaccccggacg
gtggccgtggacatcaatgacctggggaccatcaaactgagcctggaggtcacctggaac
cctttcgacaaggatgaccaagcctcggccgccagcactgtcaacaaaccccccacggtg
aacaaacgcttctccacctacaaccagagtcctcctgataccccctccttacgggaacag
gccttctatacggctccaaggagcctgtcaaggagcatgatgtcccccaaacaccgctgg
tccctgctggatgtgttccgtgacactctggctgagagactgtctcagagctgctcctgc
agtgatgtctcctcagtccacctgggctctgctaacatgcagactgacaacatgctgagg
aggcaggaggagatggagaatggcacagcctggtctaactcttcggagtcgtcagatgac
tcgtccagcccccagctgtccctggggctgcgtcacgccaacaagaatctggtccagcta
gaggttcaggccgccgcgccctccattgagatctcctttgctcccagagactctgccacc
tccacccctacccgctcagccaaaccagaggatgtgcagaaggaggagccagacactgga
gcagcagggaaagaggaggattctgggaaacaggctgtgcctaacggccaaacacgttat
tcacgctccctcagccatatcagtgagaacagtgccgatggcgtactgatggacaggtca
acttgcgaatcagtggagccctctgaggccacctccctgcagtctgggatctctataaac
gatattgagatggagatgcctgccagggcggagtcagcctctgtcccagctgagactgtg
gtgytcggggaaccatctgagccactcgccccagctactgtcaccggggaggagagcagg
ccggagagcaggtattctgcagggtctatagagtcagacacggggttagaggttgtttca
ggggctgtttcagaggtagatccagaactccagagctctgcacccactaggactgatgcc
gtgtctcagcaaggtgcctctctggatctcagggcagactcacaagcacagacccagagc
acagaggaaatatcatacactgcccacagagcggtggtggtggaggccgagaagcctggg
cctgtagtagtggccagccccacagagggtgagaagcagcaggctgtggacagtgaagtt
gaggaagccctgagtgcagtcatcgcttctctggatgactacaggggacagtttcctgag
ttacaggtcctggagcaggagctcagactactggaggagacattaacgggccgtacatgc
agttgtttgtccagtgtccagagtctggcggtggagacggctctcggcagctttgacttc
ctcaatacctcagacctggaggatgaagaggaggaggaggatggggagaaagggagtgtg
acagacaggccaccagaggagagtgcaggggaggatgagtgctgtgaggagagatgctgg
gagtcccactcctctggacctgtgagcacaggctgccaggctctagatcatacactactg
gtccatctgaaaaactgcagtgcacaacttctgaggctggggacttttgggcctctgcgc
tgtggggagatgtatgctctggaccgcctgctcagggaggcccgcgtcctcgagctcatc
agacgtgttgccaaggagacccctggaggagccactcagccagatgaggtggttccccag
ttagaacagtgccaaggggcaacattgctatggcagcagtgtacggatgatggcagtgtg
tacagcacctccacagacgctttcctcacaacactggccactgcttacaccaacagactg
cccgagagaggagttagcctggcagacacagtgttcttgcgtctggtggagaggatgctg
gagaggaggctgcccacgcgtgggggcggggtggccagagacatgctgaccctcttccag
ttctggagctacctagaggccgagggagtgagcgagttggacacacacatcattgaatta
gcggaggaggtgtggctggttcagagcctgcagtcaggggaccaggaggtactggtgaag
gccctgaagaggcctccagagagcagcctgaagagggaggggctgcatgctgtcagccta
ctgctcagggacccgcgtgggaaggtgtctgcctctgccagctccctgctccggagcctc
gccgaccagccacgccatcgagagagggccctagtaagctgtctggagcttctggagaat
gagagtgtggagacgcgagtgtgtggctgtaaagcacttgcatgtctgaaggccaaagag
agcatcgaccagctggtctatctctgtcgatcagacaaggaggatgtgagggacgctgcc
aaacaagcgctgctggtgcttggcgaggaggggaagttggcccacagacacgttgagata
tcactgcaggagggagtgccacgcctcttctcccctggcagcatggccagcaccgccttc
taa
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