Salvelinus sp. IW2-2015 (Arctic char): 111952522
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Entry
111952522 CDS
T05762
Symbol
nup205
Name
(RefSeq) nuclear pore complex protein Nup205
KO
K14310
nuclear pore complex protein Nup205
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111952522 (nup205)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111952522 (nup205)
03036 Chromosome and associated proteins [BR:
salp03036
]
111952522 (nup205)
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111952522 (nup205)
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111952522 (nup205)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup192
Nup188_N-subdom_III
Motif
Other DBs
NCBI-GeneID:
111952522
NCBI-ProteinID:
XP_023827060
LinkDB
All DBs
Position
LG26:complement(37985495..38005518)
Genome browser
AA seq
1984 aa
AA seq
DB search
MAAQMAVNSGASLWGPLKELWDTVEGAVWRRQPESVHLLDLQLKKHKPNFLSLYKNPPKS
AEQREKVRKASTEGIAIQGQQGSRLLPEQLLTEAFILSDLFDIGELAALELLLAGENQQP
HFPGLSRGLVAVLLYWDGKLCVANSLRSLIQSRHGKTFTLELSGELVALTTRFTDELMSQ
GLTRRLLTLVSEINVTREFERLQKERGLGNEKHRKEVSDLIKECRQALADCLFAWTCQSP
LGKDDTLALIAHLETVTVEADGSLDSVNLALVMALLYCLDVSFLEQGTEDREDLLQALPL
LTEKQYVSAVHSRLVDGRPWKLPGLQAVCRLAWALALHALSQLPQGSALAEFTESDEALA
DQALLGGVFLFMTEGMLGCEGFTHDEFYTRRLHSLITDFLALMPMKVKQLRNRADEDARL
VHMSLQIGSEPPSSLRKDLDHLMILIGEFYSKDPFGLELALEFWCHPESLQHTSLQGSYL
GMAMQRPPHKQVVLSKFVRQMGDLLPPTLYIPYLRMLKGLANGPQCAHYCFSLLKTNGAP
HGDNMQVTGSPVSWEHFFHSLMLYHENLRRDLPNADATHYRLPPIRGITQRELDGLTSFL
QLLCTIITWSENARLALCEHPQWTPAVVMLGLLQCSVQPVLKGELLLCLAAFGKSPEIAA
SLWQSLEYTQILQTVRAPGQKQAAGIEVELNEIESSCEEYPLTRAFCQLISTLVESALPV
NLGAGLRAPGFQPYLTFLRDAVFLPFPTRAYRRAAEKWEVADAVLEVFHKLLRDYEPQPS
DFVQETVELQGEQVSAHKPPGHSLMFHLLNDSPTLTLCLSLLEEGVRQLDTYALFPGKKQ
LESAVLHCLCLLDLALQKEVVFMDLLRESQDSLIVSPLEQLLQGVSAQSRRADHIVNIAR
YLYHSSSNPEAAFQSAKILQRIARYPNIQNRLVGDFTHDQTVSDKLMAGFVECLDNEGAE
EGLEKGDDSEPAKKEARIRHETQIHILNLLITSLELKTPNLALYLLGYEVKKPISSTNLQ
DAGVLGCPRSCLHAILSLLQRGSERRSGPVLTSQAPHLAELCYQVIYQLCVCSDTSGPTM
RYLRTSQDFLFTHLQHLPFILPGDEISALSQMSWLMKTAAIELRVTSLNRQRSHTQRLLN
LLLDDQPRTQHAADGETGMEESRSVSGFLHFDTVSKVRRKLLSVLDAINFSQDVPELLQL
DFFERTQIEQVIANCEHVNEHGHTVCNVKLLHRVLVAEVNALQGMAAIGQRPLLMEEVNS
ILQQVVERNRVRRSLSAKRHALQSWRGLVETLLTACPADLIPADDRQIIIRDLLLDLHDK
VLSEDSAGELMPIVAGAVFTLTAHLSQSVLSEQQQGAGLEGGSSSGFASIANSALHLILR
KLLDFILCTGGGFQRLRAHLYGSLLYYLQIAQKPEEPDTLQQAGKSMWERLTAPEDGFSK
LQRENLAIIESYGTALMEVVCRDACDGHEIGRMLALAVLDRILSIDRQSQWLLYVCNSGY
LRVLVESLRQDDTALQTLLSPQPPLLKPLYIYESKMALLTRVAKTGQGAVELLRCGLVAQ
LVECQVFDMVPDSDSHRVFGQRDPSGFIPSPLDRYRQILLPALRLFQVILTSTTTHHQQG
AAQVLQWLIVHADTIQGLLRCQELSMGALQELSLLTGIISKTALPGALEGQDVNSAALPE
FQGHISRFQRQCLSLLGRLAGSERERLLKQAEIAAPGDPAERREEMEVAMQQVCANIMEY
CQTLLLQSSAQAQFSICLFSPSVNEPASRDGRTDLALPSALYSRVPSLGLVLFLLKNSAA
DFFRFHQSHRQALGKLQSLEQLPPEELKELCAALVSGTGGVEKISSVQRSLLAKRRLVQL
INNRAKLLALCSYVIETCLFVMWRHLEYYLLYCTPTDPKDSLMPGASAYRSRLTDDSFGR
ALGLSRVSQQDLEQLQSDMGAGFGEALQRKLLEVEGLYSQVRSRYTFIQALVRRIRGLLR
QPKT
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcagatggcggtaaattcaggagccagtctgtgggggccgctgaaggagcta
tgggacacagtggagggtgcagtgtggaggaggcaaccagagagcgtccacctcctagac
ctgcaactcaagaaacacaagcccaatttcctctcactctacaagaacccgccaaagagt
gcagagcagagggagaaggtgcggaaagccagcacagagggcattgccatccagggccag
caggggtcacgtctcctccccgagcagctgcttacagaggccttcatcttgagtgacctc
tttgacattggagagctggcagccctggagctgctgctagcaggtgagaatcagcagccc
cacttcccaggtctgagtcgagggctggttgcagtgctgctgtactgggatggaaagctc
tgcgtggccaactccctacgctcgctcatccagtcccgccatggcaagaccttcaccttg
gaattaagtggggagctggtggccctcaccacacgcttcacagatgagctgatgagccag
ggcctgacgagacgcctactgacgctggtgtcagaaatcaatgtaacgcgggagtttgag
cgcctgcagaaagagcgaggcctgggcaacgaaaaacacaggaaagaggtatcggacctc
atcaaagagtgccgacaggcactggcagattgcctgtttgcatggacctgccaatcacct
ctgggtaaggatgacaccctggcacttattgcccaccttgagacggtgacagtggaagct
gatggctcattggacagcgtgaatctggctctcgtcatggcactgctgtactgtctggac
gtcagcttcctggagcaaggaacagaagacagagaagacctcctccaggccctgcccctg
ctgacagagaagcagtacgtgtctgcagtacacagtcgtctggttgatgggaggccctgg
aagctgcccgggctgcaggctgtgtgtcggctggcctgggccctggccctgcatgccctc
tcccagctgccccagggctcagccctggcagagtttacagagtcagatgaggcactggcc
gaccaggccctgctaggaggtgtcttcctcttcatgacagagggcatgctgggatgtgag
ggcttcactcatgatgaattctacacccgccgcctccattccctcatcaccgacttcctg
gcactcatgcccatgaaggtgaagcagctgcgtaaccgtgctgacgaggacgccagactg
gtccacatgtctctgcagataggcagtgagcctccgtcctccctgaggaaagacctggac
cacctcatgatcctgatcggagagttctatagcaaggacccgtttgggctggagctggct
ctggagttctggtgccaccctgagtccctccagcacacctccctccagggctcctacctg
ggcatggcaatgcagaggcccccacacaaacaggtggtgctgtctaagtttgtgcgtcag
atgggggacctgctgcctcccaccctgtacatcccttacctgcgcatgctgaagggcctg
gccaacggcccccagtgtgcccactactgcttcagcctgctaaagaccaacggggcccca
cacggggataacatgcaggtgaccggcagccctgtgtcctgggagcacttcttccactcc
ctcatgctgtaccacgagaacctgcgccgagacctgcctaatgcggatgccacacactac
cgcctcccgccaataaggggcatcacacagagggagctggacggccttacctctttcctg
cagctgctctgcaccatcattacctggagtgagaatgcccgcctggccttgtgtgagcac
ccccagtggacccctgctgtggtgatgctggggctgctgcagtgcagtgtgcagcctgtc
ctcaagggagagctcctgctctgcctggctgccttcgggaagtctccggagatagctgcc
tccctctggcagtcactggaatacactcagattcttcagacagtgcgggcccctggacag
aaacaagctgctgggattgaggtggagctgaatgagattgagtcgagttgtgaggagtat
cctctgaccagagccttctgtcagctcatcagcacattggtcgagagcgccctgcccgtc
aacctgggggcggggctccgtgcgccaggattccagccctatctgaccttcctgcgtgac
gctgttttccttcccttccccaccagagcctatcgccgtgctgctgagaagtgggaggta
gctgatgctgttctggaggtgttccacaagctgctgcgggactacgagccccagccctca
gactttgtccaggaaacagtggagctccagggggagcaggtgtcggcccacaagcckccc
ggccacagcctcatgttccacctgctcaacgactcgcccaccctcaccctctgcctcagc
ctgctggaggagggcgtgcgtcagctagacacctacgccctcttccctggtaaaaagcag
ctggagtccgcggtgttgcactgcctgtgtcttctggacctggccctgcagaaagaggtg
gtgttcatggacctgctgagggagagccaggactccctcattgtctcccccctggagcag
ctcctgcagggtgtcagcgctcagagccgccgtgctgaccacatcgtcaacatcgccagg
tacctgtaccacagcagttccaacccggaggcggccttccagagtgctaagatcctgcag
aggatcgcccgctaccccaacatccagaaccgactagtgggagacttcacacacgaccag
actgtgagtgacaagctgatggctggcttcgtggagtgtctggacaacgagggggctgag
gagggactagagaaaggagacgactctgagccagcgaagaaggaagcgaggatccgccac
gagacccagatccacatcctgaacctgctgatcacctccctggaactgaagacccccaac
ctggctctctacctgctgggctacgaggtcaagaagcccatctcctccactaacctgcag
gacgcaggtgtgctggggtgcccacggagctgcctgcatgccatccttagtctgctgcag
agaggcagtgagagacgctcgggtcccgtgctcaccagccaggccccacacctggctgag
ctctgttaccaggtgatctaccagctgtgtgtgtgctcggacacctcaggccccactatg
cgctacctgaggaccagccaggactttctgttcacccacctgcagcacctgcccttcatc
ctgccaggtgatgagatctccgccctgtcccagatgtcctggctcatgaagacagcggcc
atcgaactccgagtgacatcactcaatcgccagcgctcacacacccagcgcctcctcaac
ctgctgctggatgaccagcctcgcactcagcacgcagcggatggggagaccggcatggag
gagagcagatctgtcagtggattcctgcactttgacaccgtctccaaagtgcgtaggaag
ctcctcagcgtgctggatgccattaacttcagccaggatgtgccagagctgctgcagctg
gacttttttgagcgcactcagatcgagcaggtcatcgccaactgcgagcacgtcaacgag
cacggacacaccgtctgcaacgtcaagttactccatcgagtcttggtagcggaggtcaac
gcccttcaggggatggcagccattggacagaggccactgttgatggaggaggtgaactcc
atcctgcagcaggtggtggagaggaatcgtgtgcgtcggagcctgagtgccaagcgccat
gcgctgcagtcatggagaggtctggtggagaccctgctcactgcctgccctgcagacctc
atccctgcagacgacagacagatcataatcagagacctgctgctggatctgcatgacaag
gtgttgtcagaagactccgcaggagagctgatgcccatagtagccggggctgtgttcacc
ctcaccgcccacctcagccaatcggtgctgtcggagcagcagcagggggcggggctggag
ggaggctcgtcgtcgggcttcgcctccatcgctaactctgctctgcacctgatcctgagg
aagctgcttgacttcatcctctgtacgggtggtggattccagcgtctgcgtgcacacctg
tacggctctctgctctactatctgcagatcgcccagaaacctgaggagccagatacactg
cagcaagcggggaagtctatgtgggagcgtctgactgctcctgaggatggtttctccaag
ctgcagagggagaacctggccatcatcgagagctacggcacagccctcatggaggtggtg
tgcagggacgcctgcgacggccatgagatcggcaggatgcttgccctggccgtgctggac
cggatcctgtccatagaccgtcagagccagtggctgctgtacgtgtgtaacagtggttac
ctgcgtgtgttggtagagagcctgaggcaagacgatacagccctgcagaccctgctcagc
ccccagcccccgctgctcaaacctctctacatctacgagagcaagatggccctgttgacg
cgagtggctaagacaggccagggggccgtggagctgctgcgctgtggtctggtggctcag
ctggtggagtgtcaggtgtttgacatggtgcctgacagtgactctcacagggtgtttggt
cagagggacccttcagggttcatccccagccctctggaccgctacagacagatcctgctg
cctgctctcaggttgttccaggtcatcctcacgtccaccaccacacaccaccagcagggg
gcagcacaggtcctccagtggctgatcgtccatgccgacaccatccaagggctgctgcgc
tgtcaggagctcagtatgggagcgctgcaggaactctctctgctcacaggcatcatcagc
aagactgccctgccaggagctcttgagggacaggacgtgaacagtgcagctctgccggag
ttccagggtcacattagcagatttcagcgtcagtgtctgtctctgctgggccgtctggcc
gggagcgagagggagcgactcctgaagcaggcagagattgcagcccccggggaccctgcc
gagcggcgggaggagatggaggtggccatgcaacaggtgtgtgctaacatcatggagtac
tgccagaccctgctgctgcagagctcagcccaggcccagttcagcatctgtctcttcagc
ccctcggtcaacgaaccagccagccgagacggccgcacagacctggccctgccatcagcc
ctgtactctcgtgtgcccagcctgggtctggttctcttcctgctgaagaacagcgctgcg
gacttcttccgcttccaccagagccatagacaagccctgggcaagctgcagagcctggag
cagctgcccccagaagagctcaaggagctgtgtgcggccctggtgtctggtactggagga
gtggagaagatctcctctgtccagaggagccttttggccaagagacgcctggtccagctc
atcaacaacagagcaaaactgctggccctctgctcctacgtgattgagacctgcctgttt
gtgatgtggcgccacctggagtactacctgttgtactgcacccccactgaccccaaagac
tccctaatgcctggcgccagcgcctacagatcacgcctgactgacgactcgtttggacgt
gccctgggcctgtcccgagtcagtcagcaagacctggaacagctgcagagtgacatgggg
gcaggcttcggagaggctctgcagaggaagctgctggaggtggaggggctatacagccag
gtccgctcccgatacaccttcatccaggccctggtacgcaggattcgaggcctgctccgc
cagcccaagacctga
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