KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111952608
Entry
111952608         CDS       T05762                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    111952608
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:salp01009]
    111952608
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:salp03021]
    111952608
Protein phosphatases and associated proteins [BR:salp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     111952608
Transcription machinery [BR:salp03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     111952608
    Little elongation complex (LEC)
     111952608
SSDB
Motif
Pfam: ELL Occludin_ELL CMS1
Other DBs
NCBI-GeneID: 111952608
NCBI-ProteinID: XP_023827225
LinkDB
Position
LG26:25882761..25930794
AA seq 603 aa
MAALRQEHRYGLSCAKINKKAQNKTLFHVKLTDTAIRTLEAYQNLKGSLPNQPAVCFKGS
QGYIKIPAPSPEAPDALRVFSFYLSSDSKDKPQASFDCIHQHVSGEGREHLEGQGSIQDK
ITVCATDDSYQMTRERMSQVEKDIMSRSAIEIKPGTTHGKCVKIQRKQGLSSGMDSSSNK
HSPNNKKSGAPSPVALRPLRDRIIHXLALKPYRKPELLLWLERERATPKDKTDLGAVLDE
VAKLNHKDHSFTLKDEFYRLVQKDWPGYLEEEKPLIHRLLARKLQPLSSSSQLKSFQSNH
SFHKTPADSPSQLSPVKTPSVKRPVPSDLSDYQTPKKQRLLDHSLSLQSPSNGQLGPFGA
RSSSGPGNTSVQTKTEFERTNNHVQGSPNGLYTRHKLGCSSSIPKLERTEPGLAVPSPKP
PQTEPSICTDQQLANGQHKKKKSKKHKDKDRERLKQDWIENSPDLKQNQENITDNEGAKT
PVTRTSPEELPDYLIKYNTITASEQRQQYKQDFCAEYDEYRALHDRIGTITEMFVQLGSK
INTLSPGTQEYKLMEEQILQKYRKYKKKFPGYREEKKRCEYLHQKLSHIKGLILDYDRTQ
APS
NT seq 1812 nt   +upstreamnt  +downstreamnt
atggcagcgctgagacaggagcatcggtatgggctctcctgtgcaaaaatcaacaagaaa
gctcaaaataaaactctatttcacgtcaagctaaccgataccgccattcgaacgcttgaa
gcctatcagaatcttaagggatccttaccaaatcagccagcagtttgcttcaaggggagc
caggggtatatcaagatccccgccccgtccccagaggccccagatgcactccgggtcttc
tccttctacctgtccagtgatagcaaggacaaacctcaggccagctttgactgcatccac
cagcatgtctcaggggagggcagggagcacctggagggccagggcagtattcaggacaag
atcactgtgtgtgccactgatgactcataccagatgacccgagagcgcatgtctcaggtt
gagaaggacatcatgagcaggtcggccatcgagatcaaaccaggcaccacacatggtaaa
tgtgtgaagatccagaggaagcagggcctgtcgtcaggcatggacagcagcagcaacaag
cactcccctaacaacaagaagagcggggcccccagcccagtagccctcaggcccctgaga
gaccgcatcatccacrtcctggccttaaagccctacaggaagcctgagctgctgttgtgg
ctggagagggagagggccactcccaaggacaagactgacctgggagcagtactggatgag
gttgctaaactgaaccacaaagatcacagctttactctgaaggatgagttctacaggctt
gtccaaaaggattggcccggttacctggaggaagagaagccgctcatccataggctcctg
gccaggaaactgcagccactgagcagcagtagccagttgaagagtttccagtcaaaccat
tcattccacaaaacccctgcggattctccgtcacaactcagcccggtcaagactccctct
gtgaaacgccccgtgccctccgacctatccgattatcagacccccaaaaagcaaagacta
ttagaccacagtttatccctgcagtccccttccaatggacagcttggtccctttggagcc
cgtagctcatctggtccaggcaacaccagtgtacagaccaaaacagagtttgagagaacc
aacaatcacgtccagggaagccctaatggtctctacacacggcataaactgggttgctcc
tccagtattcccaagctggagaggacagagccaggcctagcagtaccaagccccaagccc
ccacagactgagccctccatctgcactgaccagcagctagccaacggccagcacaaaaag
aagaagtccaagaagcacaaagacaaggacagggagcgcttaaaacaggactggatagag
aacagtcccgacctgaaacagaaccaggaaaacatcactgacaatgagggggctaaaaca
cctgtcactcgtacatcaccggaggagctgcccgactatttaataaagtacaacaccatc
acagcctcagaacagcgacaacagtacaagcaggatttctgtgcagagtacgatgagtac
agggccctgcacgaccggatcggtaccattactgagatgtttgttcagctgggttccaag
ataaacactctgtcccccggtacacaggaatacaagctcatggaggagcaaatactgcag
aaatacagaaagtataagaaaaagttccctggttatcgggaagagaagaagcgatgcgag
tatctgcatcagaaactttctcacatcaaaggtctgatcctggactatgaccgtacccag
gccccttcatag

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