Salvelinus sp. IW2-2015 (Arctic char): 111952649
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Entry
111952649 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04120
Ubiquitin mediated proteolysis
salp04137
Mitophagy - animal
salp04144
Endocytosis
salp04340
Hedgehog signaling pathway
salp04350
TGF-beta signaling pathway
salp04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111952649
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
111952649
04350 TGF-beta signaling pathway
111952649
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111952649
04137 Mitophagy - animal
111952649
09144 Cellular community - eukaryotes
04520 Adherens junction
111952649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111952649
04121 Ubiquitin system [BR:
salp04121
]
111952649
03029 Mitochondrial biogenesis [BR:
salp03029
]
111952649
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
111952649
Membrane trafficking [BR:
salp04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
111952649
Autophagy
Mitophagy
Other mitophagy associated proteins
111952649
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
HECT type E3
111952649
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
111952649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
111952649
NCBI-ProteinID:
XP_023827344
LinkDB
All DBs
Position
LG1:complement(6100247..6165356)
Genome browser
AA seq
806 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLSKKDFFLVNTILHFGSSSTGLPDPFAKVVVDGSGQC
HSTDTVRNTLDPKWNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRL
KDTGYQRLDLNKLGPNDNDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERR
TASGRIQYLNHITRTTQWERPTRPASEYSSPSGRPLSCVVDENTPVMTPNGAAIGVLPSS
GSDPRVQERRVRSQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDP
RVPRDLSNVNCEELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPNG
PGPNSPGPNGPSPNGSRVAMESQSQNTNLSSRQSNQLKEQQPPPQVPALSPAQLPEEAEC
LTVPKYKRDLVQKLKILRQELSNQQPQAGHCRIEVCREEIFEESYRQVMKMRPKDLWKRL
MVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSY
FHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPITLDDMESVDPDLHNSLVWILDNDIT
GVLDHTFCVEHNAYGEIIQHELKPNGKTVSVSEDTKKEYVRLYVNWRFLHGIEAQFLALQ
KGFNEVIPQHLLKSFDEKELELIVCGLGKIDIADWKSNTRLKHCTTDSNVVKWFWKAVES
YDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDANTNNLPKAHTCFNRIDV
PAYEHYDKLYDKLLTAIEETCGFAVE
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatcaaggagttaggagaaatggcccagtgaaactgcggttgacagtgctgtgt
gcgaagaacttgtcgaagaaagacttcttccttgtgaatacaatcctccattttggctcc
tcctccacagggctgcctgacccctttgccaaagtggtggtggacggctcggggcaatgc
cactccacagacaccgtaaggaacacgctggaccccaagtggaaccaacattacgacctg
tacattgggaagtctgactccatcaccatcagtgtgtggaatcacaagaagattcacaag
aagcagggggccggcttcctgggctgtgtacgccttctctccaacgccatcaaccgcctc
aaagacaccggctatcagagactggacctgaacaagctgggccccaatgacaacgacaca
gtgagaggccagatagttgtgagtctacagtccagagaccgtatcggcacaggaggcccc
gtggtggactgcagccgtctgtttgataatgatttacctgacggctgggaggagcggaga
acagcctctggtcggatccagtaccttaaccacatcacacgcaccacgcaatgggagagg
cccacccggccggcgtctgagtactccagcccctccgggcggcccctcagctgcgtggtg
gatgagaacacgccggtcatgacacccaacggagcggccatcggtgtgctgcccagcagt
ggcagtgacccgcgggtccaggagagacgcgtccgctcccagagacacaggaactacatg
agcaggacccacctccacaccccgccagacctgccagagggatacgagcagagaaccacg
cagcagggccaggtgtacttcctccacacccagacgggcgtcagcacatggcacgacccc
cgagtgcccagggatctgagcaacgtcaactgtgaggagctgggtcctctgccgccgggc
tgggagatccgcaacacggcaacggggcgcgtctactttgtggaccacaacaaccgaacc
acgcagttcaccgacccgcgcctctccgccaacctccacctggtcctcaatccaaacggc
cctggtccaaacagccctggtccaaacggtcctagtccaaacggttcccgcgtggccatg
gagagccagagccagaacactaacctcagtagtcgtcagtcgaaccagttgaaggagcag
cagccccccccgcaggtcccggcgttgtccccggcccagctccccgaggaggccgagtgc
ctcaccgtgcccaagtacaagagggacctggtccagaagctcaagatcctccggcaggag
ctgtccaatcagcagccccaggcaggacactgtcgcatcgaggtctgccgcgaggagatc
tttgaggagtcgtaccgccaggtgatgaagatgcgtcccaaggacctgtggaagagactg
atggtcaagttcagaggagaggagggcctggattacggaggagtggccagggagtggctc
tacctgctgtcccatgagatgttgaacccctactacggcctgttccagtactccagagac
gacatctacaccctgcagatcaacccagacagcgccgtcaacccggagcacctgtcctac
ttccactttgtgggccgtatcatgggcatggcggtgttccacggccactacatagacggg
ggcttcaccctgcccttctacaaacagctgctggggaaacccatcaccctggacgacatg
gagtcagtggacccggacctccacaacagcctggtctggatcctggacaatgacatcacg
ggggtgctggaccatacgttctgtgtggagcacaatgcctacggcgagatcatccagcac
gaactgaagcccaacggcaagactgtctctgtctccgaggacaccaagaaggagtatgtc
aggctgtatgtgaactggcgtttcctccacggcatcgaggctcagttcctggccctgcag
aagggcttcaacgaggtcatcccccagcacctgctcaagtcctttgacgagaaggaacta
gagttgatagtttgtggcctggggaagatcgacatagcagactggaagagcaacacacgt
ctgaagcactgcaccacggacagcaacgtggtcaagtggttctggaaggccgtggagtcc
tacgacgaggagaggagggccagactgctgcagtttgttaccgggtcatctagagtccca
ctgcagggattcaaggctttacaaggtgccgcggggcccaggctcttcaccatccaccag
atcgatgccaacaccaacaatctacccaaagcccacacctgctttaaccggattgatgtt
cccgcctacgagcactatgacaagctgtacgacaagctgctgacagccatcgaggagacg
tgtggctttgcggtggaatga
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