Salvelinus sp. IW2-2015 (Arctic char): 111952670
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Entry
111952670 CDS
T05762
Name
(RefSeq) TBC1 domain family member 15
KO
K20168
TBC1 domain family member 15
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111952670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111952670
Membrane trafficking [BR:
salp04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
111952670
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH_RBD
Motif
Other DBs
NCBI-GeneID:
111952670
NCBI-ProteinID:
XP_023827332
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Position
LG26:complement(42052563..42072097)
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AA seq
671 aa
AA seq
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MAADTPPKVLFEHEGVFIHSNEDGEEADLLVSGFLRLIDKDGETIVEYKPLEDSVDPSNM
LCAGKDSSSVMEWAQCPGEERSTPQQAVVEQQQSYETEWDMINAVSFPKRKPCSNGEGAL
NHTHEKSKWAFTFSVWDLRSITVKEEGSSRLMFRLKEPPTSLPVLHFHQGGSEDFLDCLR
RYALITEAPDDETCLLVSTPNRALSQSFENLLDDNNYGLVTKLKNDPYVTTLGGFSKVTN
YIFDAFRGPELEQQQRPLEEMADLDILGEVIPGLEINQQEEPGFEVITRIDLGARPEVMR
RQPLSAEDWAEHQEKGGRMKNVPHLKKIIFKGGLCHAVRKEAWKFLLGYYPWDSTYEERK
GLQRRKTDEYFRMKLQWKSVSEEQERRNSRLRDFRSLIEKDVNRTDRTNRFYEGIDNPGL
VLLHDILMTYCMYDFDLGYVQGMSDLLSPILYVMENEVDAFWCFVSFMDHMHQNFEEQMQ
GMKTQLIQLSALLRLLDLAFWNYLESQDSGYLYFCFRWLLIRFKRELSYPDVLRMWEVMW
TGLPCQNFHLLVCCAILDSEKRKIMEENYGFNEILKHINELSMKLDIEEILHKSEAICMQ
IRSCKDLPHSIIEILGFNTESELPRLEGREFGTLDSPQSPRPTQRQEVFSNGHNGHYREP
PQNGCKVTFIS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgatactcctcccaaggtgttatttgaacatgaaggtgttttcatacactca
aacgaagacggtgaagaggcagatctccttgtttctgggttcctacggctcattgataag
gatggtgaaactatcgtggaatacaaacccttggaggacagtgttgatccatccaacatg
ttgtgtgctggcaaggattccagctcggtgatggagtgggcccagtgtcccggggaggag
aggtcgactcctcagcaggctgtggtagagcagcagcagagctacgagactgagtgggac
atgatcaatgccgtctcctttcctaagaggaaaccctgctccaacggagagggtgcattg
aaccacacgcatgagaaaagcaagtgggccttcaccttcagtgtgtgggacctgaggtct
atcacagtgaaggaggagggctcgtcccgcctgatgttcagactgaaggagccccccacc
tccctgccagtcctccacttccaccaagggggtagtgaagacttcctggactgcttgagg
agatatgccttgatcactgaggccccggatgatgaaacctgcctgctggtcagcactccc
aacagagctctgtctcagtccttcgagaaccttctggatgacaacaactacggccttgtt
actaagctcaagaatgatccgtacgtgacgaccctggggggcttctccaaggtcaccaac
tacatcttcgatgcgttccgtggtccagagctggagcagcagcagcgtcccctggaggag
atggctgacctggacatcctgggagaggtcatccctggcctggagatcaaccagcaggag
gagccgggctttgaggtcatcaccaggatcgacctgggagcaaggccagaggtgatgagg
aggcagccactgtctgcagaggactgggctgagcaccaggagaagggaggaaggatgaaa
aatgtgcctcacctcaagaaaataatattcaaagggggcttgtgccatgcggtgaggaaa
gaggcctggaagtttctgctggggtattacccctgggacagcacctacgaggagaggaaa
ggcctacagaggaggaaaacggatgagtacttcaggatgaagctccagtggaagtcggtg
agtgaggagcaggagaggaggaactccaggttgagagacttcaggagcctgatagagaag
gatgtgaacagaacagaccgaaccaacaggttctatgagggcatagacaacccaggcctg
gtgttactccacgacatcctgatgacgtattgcatgtatgattttgatctggggtatgtc
cagggaatgagtgacctcctctccccgatcctctatgtgatggagaatgaggtggatgcc
ttctggtgttttgtctccttcatggatcatatgcaccagaactttgaggagcagatgcag
ggcatgaagacacaactgatccagctcagtgctctgttgaggctgctcgacctggccttc
tggaactaccttgagtcgcaggattcaggttacctgtatttctgtttccggtggttgctg
atccgcttcaagagggagctcagttatccagatgttcttcgtatgtgggaggtcatgtgg
actggcttgccctgccaaaacttccatttgctggtgtgctgtgccatcctagactcagag
aaacggaaaatcatggaggaaaactatggcttcaatgagatcctcaagcacatcaatgaa
ctttcaatgaaactggacattgaagaaatcctccacaaatcagaggctatttgtatgcag
atcagaagttgtaaggatttgcctcattcaataattgagatcctgggattcaacacagaa
agcgaacttcccagattagaagggcgggagtttgggactcttgattctcctcagtccccc
agacccacacagagacaggaggtcttctctaatggtcacaatggacattacagagaaccc
cctcaaaacggctgcaaagtcactttcatatcatag
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