Salvelinus sp. IW2-2015 (Arctic char): 111952772
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Entry
111952772 CDS
T05762
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04115
p53 signaling pathway
salp04120
Ubiquitin mediated proteolysis
salp04137
Mitophagy - animal
salp04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111952772
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
111952772
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111952772
09143 Cell growth and death
04115 p53 signaling pathway
111952772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
salp04121
]
111952772
Enzymes [BR:
salp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111952772
Ubiquitin system [BR:
salp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
111952772
BRITE hierarchy
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GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
TerY_C
Motif
Other DBs
NCBI-GeneID:
111952772
NCBI-ProteinID:
XP_023827442
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Position
LG26:20146880..20162479
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AA seq
334 aa
AA seq
DB search
MSGRANVQPMNSWKGVLKLFTCIATRTANNPKEVLTFQEKKKALFGNLMDEEMSRQTATA
LPTGTSKCAPSQRIPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPK
LTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKADHEELCEFRPYSC
PCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFH
FMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIA
TAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcagagctaatgtgcagcctatgaactcatggaagggggtgctcaagctcttc
acatgcatagccactagaacagccaacaaccccaaagaggtcctcacatttcaagagaag
aagaaagccttatttgggaatcttatggacgaagaaatgagtcgccagaccgccacagcg
ctgccaacaggaacctccaagtgcgccccctcccagcgcatccccaccctgtccggcact
acagcctctaacagcgacctggccagcctgtttgagtgccctgtctgcttcgactatgtg
ctgccccccatcctgcagtgccagagcggccacctggtctgcagcaactgccggcccaag
ctcacttgctgccccacctgccggggcccgctgggctccatccggaacctggccatggag
aaggtggccaactctgtgctgttcccctgcaagtatgcgtcgtcgggatgcgaggtaacg
ctgccccacacagacaaggcggatcacgaggagctgtgtgagttccggccgtactcctgc
ccctgcccaggggcctcctgtaagtggcagggctcgttggacgcggtaatgccccacctc
atgcaccagcacaaatccatcaccacgctgcagggcgaggacatcgtgttcctggctaca
gacattaacctgcctggggcagtggactgggtcatgatgcagtcctgctttggtttccac
ttcatgctggtcctggagaagcaggagaagtacgacggccaccagcagttctttgccatt
gtgcagctaatcggcacgcggaagcaggcagagaactttgcctaccgcctggagctcaac
gggcaccggcgacggctcacctgggaggccacgccccgttccatccacgagggcattgcc
acggccattatgaacagcgactgcctggtgtttgatacctccatcgcgcagctgttcgct
gagaatggaaacctgggcatcaacgtcaccatatccatgtgctga
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