Salvelinus sp. IW2-2015 (Arctic char): 111952805
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Entry
111952805 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor RFX4-like
KO
K09174
regulatory factor X 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111952805
Transcription factors [BR:
salp03000
]
Eukaryotic type
Other basic domains
RF-X
111952805
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Ortholog
Paralog
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
111952805
NCBI-ProteinID:
XP_023827486
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Position
LG26:complement(35295724..35324119)
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AA seq
736 aa
AA seq
DB search
MHCGLLEEPDMDSTESWIERCLNENESKRYSSHTSLGNTSNDENEEKENNRASKPHSTPA
TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKHDTQPVNAASFGKIIRQQFPQLTTRRLG
TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPE
FPNVKDLNLPASLSEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSSTVVNMLGVCDSILYKAISWVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHD
LPENLRNIKFELSRRFSQVLKRQTSLNHLCQASRTVIHSADITFQMMEDWRNVDLNSITK
QTLYTMEDTREEQRRLIIHLYQEFDRLLEEQSPIEAYIEWLDSMVDRCVVKVAGKRPGCL
KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANEL
MMSMKAEGNTAEQAEEMMLTETTPTSTSPGPFSPAKSVTSVGVPAASSPAAAQSPEYTGA
TATTGAVQSYTWSLTYTVTTSGGTPSEGGQQQPCMRSGAPVPPPSSAHRLPVYAHRDEHG
FTGSYNYGSYSNQHPHSIQSQYPSLAHEPGIPAPLHYPAYHRTSTQYPLNSQMSRMEPCL
MGGTPRLHPTPVTPRWADVSPANSCYTSPPIHSSRYAASGDMYSPLAPRRNSEYEHSQHF
PGFAYINGEATTGWAK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgggctgctggaggagcctgatatggattccacagagagctggattgaaaga
tgtctcaacgagaacgagagcaagcggtattccagtcacacgtccctggggaatacgtcc
aatgacgaaaatgaggagaaagaaaacaacagggcatctaaaccacattcaacaccagct
accctmcaatggctggaggagaactatgagattgcagaaggggtttgtatcccccgcagt
gctctctacatgcactacctggacttctgtgagaagcacgacacacagcctgtcaacgcc
gccagctttgggaagattattagacaacagtttccacaactaaccacaagaagactgggg
actaggggacagtcaaagtaccactactatggcatcgctgtgaaggagagttcccagtac
tacgatgtgatgtactccaagaagggggcggcgtgggtgaacgagacgggcaagaaggag
gtcaccaagcaaacagtggcgtattcaccacgctccaaactggggacgctcctgccagaa
tttccaaatgtcaaagacctaaatctgcccgccagtctgtcagaagagaaggtgtcaacg
ttcatcatgatgtacagaactcactgccagaggatactggatacagtaatacgcgcaaac
tttgacgaggtccagagcttcctgctgcacttttggcagggcatgcccccgcacatgctc
cctgtcctgggctcctccactgtggtcaacatgttgggcgtctgtgactccattctttac
aaggcaatctcttgggttctcatgcccacagtccttcaagcactgcctgatagtttgacc
caggtgatccggaagtttgccaaacagctggatgagtggcttaaagtagcacttcacgac
ctgcctgaaaacctgaggaatatcaagttcgaattatctagaagattttctcaggttctc
aagcggcagacatctttgaaccatctatgtcaggcgtcgcggacggtgatccacagtgca
gacatcacctttcagatgatggaggactggaggaacgtggacctgaacagcatcaccaag
cagacactttacaccatggaggacacacgggaggagcaacggcggctcattatccacttg
taccaggagtttgaccgtctgttggaggagcagtctcctatagaggcctacatagagtgg
ctggactccatggtggaccgctgtgttgtcaaggtggcagggaagaggcctgggtgcctg
aagaaggtggcccagcagttcctgctcatgtggtcgtgcttcgggacacgagtcatccgg
gatatgaccctccacagtgcgcctagcttcggctcgttccacctgatccacctgatgttt
gatgactatgtgttgtacctgctggagtccctgcactgccaggagagggccaatgagctc
atgatgtccatgaaggcagagggcaacacagctgagcaagcggaagagatgatgctgacg
gagaccacgcccacatccacgtccccagggcccttctccccggccaagtctgtcacctca
gtgggggtcccagccgccagctcccccgctgctgcccagtccccagagtacacaggggcc
acagccaccacaggagctgttcagtcatatacctggtcccttacgtacacagtgacaacg
tcaggcggcaccccttctgagggcggacagcagcagccttgcatgcgcagtggtgcccca
gtgccccctccctcctccgcccatcgactgccagtctacgcacacagggatgagcacggg
ttcactgggagctataactacggaagctactccaaccagcacccccactccatccagagc
cagtaccccagtctggcccatgaaccgggcattcctgcccccctccattatcccgcctac
caccgcacttctacacagtacccactcaacagccagatgtcacggatggagccctgcttg
atgggaggtactcctcggctgcaccctacgcctgtgaccccccggtgggctgatgtctca
ccggccaacagctgttacaccagtccccctatacactcctcccgctacgccgcctctgga
gacatgtactcccccctggcccctcgcaggaactctgagtatgaacactctcaacacttt
cccggtttcgcctacatcaacggagaggccactacaggctgggccaagtag
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