Salvelinus sp. IW2-2015 (Arctic char): 111952936
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Entry
111952936 CDS
T05762
Name
(RefSeq) homeobox protein SIX6-like isoform X1
KO
K19473
homeobox protein SIX3/6
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111952936
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
111952936
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
111952936
NCBI-ProteinID:
XP_023827736
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Position
LG3:23039083..23045937
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AA seq
266 aa
AA seq
DB search
MFPLPMFTPEQVARVCENLEETGDIERLGRFLWSLPDAVPGSAGEALNRHESVMRARALV
AFHGGNFEALYQILQSHRFTRESHAKLQDLWLDAHYREAERLRGRPLGPVEKYRIRKKFP
LPRTIWDGEQKTHCFKVRHQAERTRSLLREWYLQDPYPNPSRKRHLAQATGLTPTQVGNW
FKNRRQRDRAASAKNRLQQDPTHLPSGCSPEGSVQEHHAHHPRLLAASPCHPGSPEASDC
STGTGPRGTGASTPDISVSSDSEFES
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgttccctttgcctatgttcactccggaacaagtggctcgggtgtgcgagaacctcgag
gagaccggcgacatcgagcgcctggggcggttcttatggtccctgcctgatgctgtccct
ggctccgccggggaggctctcaaccgccacgagtcagtgatgcgcgcccgggcgctggtc
gccttccacggaggaaacttcgaggcgctttaccagatcctccagagtcaccgctttaca
cgcgagtctcacgccaaactccaagatctgtggctggacgcgcattatcgcgaggcagag
cggctccggggccgtcccctgggaccggtggagaagtaccgtatccggaagaagttccca
ctgcctcgcaccatctgggacggcgaacagaagacgcactgctttaaggtgagacaccaa
gctgagagaactcgtagcctgctcagggagtggtacctccaggacccctacccaaacccg
tccaggaaacggcacctggcccaggcaacgggactcacgcccacacaggttggcaactgg
ttcaagaaccgacgccagagagacagggccgcgtcggcaaagaacagactgcagcaggac
cccacccacctgccttccggatgctcccctgagggttctgtccaggagcaccacgcccac
cacccccgcctgctggctgcctccccctgtcacccgggcagccccgaggccagcgactgc
agcactggcaccggcccccggggcaccggagcctccacccccgacatctccgtcagcagc
gacagcgagtttgaatcctga
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