Salvelinus sp. IW2-2015 (Arctic char): 111952989
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Entry
111952989 CDS
T05762
Name
(RefSeq) RNA-binding protein 4 isoform X1
KO
K13189
RNA-binding protein 14
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
111952989
Spliceosome [BR:
salp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111952989
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
111952989
NCBI-ProteinID:
XP_023827810
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Position
LG3:23193361..23202548
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AA seq
645 aa
AA seq
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MDKSNTVKLFVGNLALDTTQEELSAIFESYGQVVSCSVLRQFAFVHLQGEGAAERAISEL
NGREFRGRNLVVEESRGRPLHSTKVFVGNLSGMCTTEDLQELFQTFGKVLECDKVKARLS
SSAGYAFVHMENKEEALLAIEALHGTSFKGRPLSVELSKVQPSKQTPTGKIPCVSCGKQG
HYAGECPVGKPSLEQYQSQAAVLAAAAAAAAGLPLQVQQSVHNSVYNTSTFDPTYAALTG
XTTGTRXXGNPVNQAVYGALATQVYGANVANQLYGVQAANQAAALTQAGATQVYARSMNP
SHAALYSQLSQIAASPAAAYSTPVYAHAMANHHHHPGAVYLAAPGVEMPTTAAAINQAYA
LAPALYGGAQHAYGHMGMGAMSVSADPSAAIFEAARVQHYFAQGQQVLAEQQNAAAAQAA
KSGERDRSPLRRSAGSLLPDPVMKPFMYQRAPKQRRPLLPTPAGRAAEEEAEAAEDPMTR
DQCQQYAEYYQQQHQQYQQLQQLQEQYQQYAEYYQQQHQQYQQLQQLQYYAEYYQQYQQY
QQLQQYQQLQQYQQLQQLQYAYPPPNHHAIAAIPAHAMAGHAHHHGQPAHVTALDAALRP
VVPASAMVAVPRVYESPLPPPPNRKEAVLRRAPEISLHTPEPPFR
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggacaagagcaacacggtgaagctcttcgtgggcaacctggctctggacaccacccag
gaggagctgtcggccatctttgagtcgtatggccaggtggtcagctgcagcgttctccga
cagttcgccttcgtacacctacagggcgagggggctgcagagcgggccatcagtgagctg
aacggcagggagttccgggggaggaacctggtggtggaggagtcccggggcagaccgctc
cactccaccaaggtgtttgtgggcaacctgtcgggcatgtgcaccactgaggatctccag
gagctcttccagaccttcgggaaagtactggagtgcgacaaggtcaaagccaggctctcc
tcttctgcaggatacgcctttgtgcacatggagaataaggaggaggctctactggccatc
gaggccctccacggcacctccttcaagggacgcccgctctccgtggagctctccaaggta
cagccttctaagcaaacccccaccgggaagatcccttgtgtgagctgtgggaagcagggc
cactacgctggggagtgccctgtagggaagccctctctggaacagtaccagagccaggca
gccgtgttagctgcagccgcagccgccgcagccggcctcccccttcaggtccagcagagt
gtccacaactctgtctacaacacctcracctttgaccccacmtacgckgcgytgacgggy
cwcaccaccggcacgcgrrcggamggcaaccccgtcaaccaggcagtgtacggtgccctg
gcgacgcaggtgtacggcgccaacgtggccaatcagctctayggrgtccaggcagcmaat
caggcggcagcgttgacgcaggcgggcgccacgcaggtgtacgccaggtccatgaacccc
agccacgccgccctctacagtcagctcagtcagatcgctgccagccccgccgctgcctac
tccacacccgtctacgcgcatgccatggccaaccatcaccaccacccaggggccgtctac
ctggcagcccctggcgtagagatgcctacgaccgctgctgccatcaaccaggcctatgcc
ttggcaccggcgctctatgggggtgcccagcatgcctacggtcacatggggatgggagcc
atgagcgtgtcggcggacccgtcggctgccatttttgaggcagcgagggtgcagcactac
ttcgcccagggacagcaggttctggccgagcagcagaatgcggcggcggcccaagcggca
aagtccggggaaagggaccggagtcccctgaggcgttcggcggggtccctactgcccgac
cctgtcatgaagcccttcatgtaccagagagcgcccaagcaacgccggccgctgctcccc
acccccgctgggcgagctgcagaggaggaagcggaggctgcagaggaccccatgactaga
gaccagtgtcaacagtacgctgagtactaccaacaacagcaccaacagtaccagcagctc
cagcagttacaagagcagtaccaacagtatgctgagtactaccaacaacagcaccaacag
taccagcagctccagcagttacagtactatgcggagtactaccagcagtaccagcagtat
cagcaactccagcagtaccagcaactccaacagtaccagcaactccaacagctccagtac
gcctacccgcctcccaaccaccacgccatagctgccatccctgcccacgccatggcgggc
cacgcccaccaccacggccaaccggcccacgtcacggcgctggacgccgccctcaggcca
gtggtgcccgcctccgctatggtggcagtgcccagagtgtatgagtcgccgctgccgccg
ccaccgaaccgcaaggaggccgtcctccgccgagcccccgaaatctcccttcacacgcct
gagccccccttccgatag
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