Salvelinus sp. IW2-2015 (Arctic char): 111953048
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Entry
111953048 CDS
T05762
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1-like isoform X1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
111953048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111953048
Membrane trafficking [BR:
salp04131
]
Exocytosis
Others
Others
111953048
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
111953048
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
RBD-FIP
Rod_CreS
AAA_13
DUF5798
GAS
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
111953048
NCBI-ProteinID:
XP_023827901
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Position
LG26:30043904..30073862
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AA seq
1114 aa
AA seq
DB search
MYGSARSVGRADANHSGGGRDGGSSQGSGRSPXLPRSPRMGHRRTNSTGGSGGCPGGAGG
KTLSMENIQSLNAAYATSGPMYLSDNEVAMSDRVNKSGREMTTMGRQRVTYGSRASAGGG
GGVAASTPNIATSAPANAGLPGGMMAGDSLAFGDHHMASTVPHSLRQARDNTILDLQAQL
KEVLRENELLCREVEVKESKLSSSMNSIKTFWSPELKKERALRKDEVSKITVWKEQYRVV
QDETQHLHMTVQALQDELRIQRDLNQLLQQDPASQGRELALNSEPTEENYRRLHGDHERQ
AKELFLLRKTLEEMELRIDTQKQTLGARDESIKKLLEMLQSKGPSAKASEEDQERTRRLA
DAEMHRHHLESLLDQRDRETAALREELHRRYEGTPESTKTKALQTVIDMKDAKINSLERG
LRDMEEEVMMLKSNGLLSCEERQEDMKQMEVYRSHTKFMKNKMDQVKQDMSRKDTELLGL
QTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETTLNKKSKQI
QEMSEEKGTLNGEIHDLKDMLEVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQ
TDTSNTDTALNTLEESLAEKERIIERLKEQRDRDDREKTEEIDSNKKELKDLKEKVSLLQ
GDLSDRETNLLDLKEHASSLASSGLKKDSKLKSMEISLDHKKEECLKLENHLKRAQNATL
EAKANTELSERITSLEQEVTRBREDSGKAQAEVDRLLEILREMENEKNDKDRKINELENQ
SSRQTKDQSKKVACLKHKEQVEKSRNARLVDEAKKREDNISESSQQVKDSLRLKTERIEE
LEEALRESVQITAEREMVLAQEEAARNHQEKQIEELLGAMEKVKQELESMRAKLSSTQQS
LCEKEAHLTTLRAERRKHLEEVLEMKQEALLAAISEKDANIALLELSSSKKKKTQDEVAL
LKREKDRLVQQLKQQTQNRMKLMADNYEDDHLKTAPDQTNHKPSPDQMIPPLLSLSENRN
KLKLYIAHLTDLCHDRDPSILSVLTPPTHYHHANPPAWEEELHKMTLEQLEMELELCEKE
SGELQEYANSVLQQIADYCPDILEQVVNALEESC
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcagcgcccgttccgttggccgagcggatgccaaccacagcggaggagggaga
gatggggggagcagccagggttctgggcgctcccctcytctcccccgctcaccacggatg
ggccaccgtcgcaccaacagcacggggggcagcggaggatgtccaggcggagcmgggggt
aagaccctctccatggagaacatccagtccctcaatgcagcctacgccacctcaggaccc
atgtacctgagcgacaacgaggtcgccatgtccgaccgcgttaacaagagtggtcgggag
atgaccacaatggggcgacagagagtgacatacgggtcgagggcgagcgcaggtgggggt
ggaggcgtggcagccagcacgccaaacatcgccacgtcggccccagccaacgctgggctc
cctgggggtatgatggcaggtgactccctggcttttggggatcaccacatggcctctacg
gtgccccactccctgagacaagcccgggacaacaccatactggacctgcaggcccagctc
aaagaggtactgcgtgagaacgagttgctgtgtcgtgaggtggaggtgaaggagagcaag
ctgagttcctccatgaactccataaagaccttctggagccctgagctgaagaaggagaga
gccctaaggaaggacgaggtgtcraagatcactgtctggaaggaacaataccgcgtggtg
caagacgagacacagcacctccacatgacggtccaggccttgcaggatgaattgaggatc
cagagagacctgaaccagctgctccagcaggaccctgccagccagggtcgcgaactggct
ctgaactctgaaccaacggaggagaactaccggcgacttcatggggaccacgagcgtcag
gccaaggagctgttcctgctcagaaagaccctggaggagatggagctgaggatagacacc
cagaaacagaccctgggcgccagggacgagtccatcaagaaactgctggagatgctgcag
agcaaagggccgtcggctaaggcctcagaggaagaccaggagagaacaaggagactggct
gatgctgaaatgcacagacaccatctagagtccctactggaccagagagacagagagacg
gctgctctacgagaggagctgcatcgtcgatatgagggaaccccagagtccaccaaaacc
aaggctctacagacagtcatcgacatgaaggatgctaagatcaactctctggagcgaggt
ctgagggacatggaggaggaggtgatgatgctcaagtccaacggcctgctgagctgtgag
gagagacaggaggatatgaaacagatggaggtctaccgcagccacaccaagttcatgaag
aacaagatggaccaagtaaagcaggacatgtccaggaaggacacagagctgctaggttta
cagaccaagctggagactctgaccaaccagttctctgatagcaaacagcacattgaggtc
ctcaaggagtcgctgaccgctaaagaacaacgagctgccatcctacagacagaggtggat
gcgttgcgtctgcgtctggaggagaaggagaccacgctgaacaagaagagtaaacagatc
caggagatgtctgaggagaagggcacgctcaacggagagatccacgacctcaaggacatg
ctggaggtcaaggagcgcaaggtcaatgtcctgcagaagaagattgagaacctgcaggaa
cagctgagagacaaggagaagcagatgagtagcctgaaggagagagtcaagtctctacag
acagacacctctaacacagacacagctcttaacacactggaggagtccctcgccgagaag
gagcgcatcatcgagcgtctgaaggagcagagagacagagacgacagggagaagactgag
gagatcgacagcaacaagaaagaactgaaggatctgaaggagaaagtcagtctgctgcag
ggagatctgtctgacagagagaccaatctgttggacctaaaggagcatgcatcatccctg
gcctcctcggggctgaagaaggactccaagctgaagagtatggagatctctctggaccat
aagaaggaggagtgtctcaaactggagaaccatcttaagagggcccagaatgcgacgttg
gaggccaaggcgaacacagagctgtcggaacgcatcacctccctggagcaggaagtgacc
cgaracagagaggattctggcaaggctcaggcggaggtggaccggctgctggagatcctg
agagagatggagaatgagaagaacgacaaggaccgcaagatcaacgagctggagaatcag
tcctccaggcaaaccaaggaccagagtaagaaggttgcatgcctgaaacataaggagcag
gtggagaagagtaggaacgcccgactggtggacgaagctaaaaagagagaggacaacatc
tcagagagctctcaacaggtcaaggactctctgcggttgaagactgagcgtatcgaggag
ttagaggaggctctgagggagagtgttcagattacagcagagagagagatggtgctggca
caggaggaagctgccaggaaccaccaggagaaacagattgaggagctgctgggggccatg
gagaaggtgaaacaggagctggagtccatgagggccaagctgtcgtctacccagcagtcc
ctgtgtgagaaggaggcccatctgaccacgctgagggctgaacgcaggaaacacctggag
gaggtgctggaaatgaaacaggaggcgctgctggcagccatcagtgagaaggatgccaac
attgccctgctggagctgtcctcgtccaagaagaagaagacgcaggacgaggtggctctg
ctaaagagagagaaggaccgtctggtacaacagctcaaacagcagactcagaaccgtatg
aagctaatggcagacaactatgaggacgaccacctgaagaccgcccccgaccagaccaat
cacaaaccttctccagatcagatgatcccccctctcctgtccctgagtgagaatcgcaat
aagcttaagctctacattgcccacctgactgacctctgccacgaccgagaccccagcatc
ctcagcgtcctgaccccaccgacccactatcaccacgccaacccaccagcctgggaggag
gagctacacaagatgactttggagcagttggaaatggagttggagttgtgtgagaaggag
agtggggagctgcaggagtatgccaactcggtgctgcagcagatcgctgactactgccct
gacatcctggagcaggtggtcaatgcgctggaggagtcctgctga
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