Salvelinus sp. IW2-2015 (Arctic char): 111953081
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Entry
111953081 CDS
T05762
Name
(RefSeq) transcription factor HES-1-like
KO
K06054
hairy and enhancer of split 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03460
Fanconi anemia pathway
salp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
111953081
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111953081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111953081
03400 DNA repair and recombination proteins [BR:
salp03400
]
111953081
Transcription factors [BR:
salp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
111953081
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
111953081
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
111953081
NCBI-ProteinID:
XP_023827945
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Position
LG26:2511495..2513461
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AA seq
267 aa
AA seq
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MPADILEKTSVSPIAATAASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALNSDPTVLGKYRAGFRECTNE
VTRFLSTCEGVNTEVRTRLLGHLASCMTQINAMNYPTQHQIPTGPPHRAFGQSMVHIPNS
SPQGNVMPQPCKGGSPRSMSPETTKVYGGFHLVPATDGQFAFLIPNAAFTPNGPVIPVYA
NQVNTPVPAAVSPGAPTGNSDSVWRPW
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgatatactggaaaagacatcagtctctcctattgctgctactgcagctagc
atgaacacgacacctgataaacccaagacggcttccgagcacaggaagtcatccaaacct
atcatggagaaaaggagaagagccagaatcaacgaaagcttgggacagttgaaaacactt
atcctggatgcgctcaaaaaagatagttccagacactcgaaacttgaaaaggccgacatc
ctggagatgaccgtgaaacatctccggaacctccagagagctcaaatgactgctgcgttg
aactctgatcccaccgtgctagggaaatacagagcaggattccgcgagtgcacaaatgaa
gtcacccggttcctgtccacctgcgagggggttaacaccgaggtcaggacgcggcttctc
ggtcacttggccagctgcatgacgcagatcaacgctatgaactaccccacgcagcaccag
atccctaccgggcctccccaccgcgccttcggccagtccatggtacatatccccaactca
tctccgcagggcaacgtgatgccccagccttgtaaaggtggctctccccggagcatgtca
ccagaaacaacaaaagtatacggcggcttccacctcgtacctgccacagatggacaattc
gccttccttatccccaatgcagcttttacgcccaacggtcccgttatccccgtgtacgcg
aaccaggtcaacacgcctgtcccagcggcggtgtcccccggtgcaccgacaggcaactcg
gactcagtgtggcgaccctggtag
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