KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111953273
Entry
111953273         CDS       T05762                                 
Name
(RefSeq) DDB1- and CUL4-associated factor 11
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:salp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:salp04121]
    111953273
Ubiquitin system [BR:salp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     111953273
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WDR55 Beta-prop_EML_2 WD40_WDHD1_1st WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_LRRK2 Beta-prop_WDR19_1st PROPPIN Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 111953273
NCBI-ProteinID: XP_023828207
LinkDB
Position
LG27:complement(8047353..8064838)
AA seq 541 aa
MGSQSSSGMSGGRGSSGNPDQSEAESNQSSSSNNSNSSRSRRSAEGQQGDRQSTAEEDVD
LAQVLAYLLRRGQVRLVHGSGATGLQLVQSYSDSDEDSDGAWEGRLGDRYNPPVDSQPDT
QELDRSEIRTQILLTTASSDLKGRQSFTHMLTEREQGRCRGSSFSHGECSRIRSHFLPNH
VTHKDTYQQKAFCGVYSDDGNMFLSACQDQNIRLYDTSSGRFNLKQTVKARDVGWSVLDV
CFTPDSHNVLYSSWSDYIHVCSVDGDSETHTALDLNPDERRFCVFSLAASTDGKEILGGA
NDGCLYVFDREQNRRTLKIDAHEDDVNAVAFADSSSQLLFSGSDDALCKVWDRRTLREDR
PQPVGQLSGHRDGITFIHSKGDARYLISNSKDQSIKLWDVRKFSPKEGLAASRLAVTQQN
WDYRWQQVPQRALKRHKLTGDTSVMTYRGHGVLHTLIRCRFSPEFTTGQRFIYTGCSTGK
IIVYDVLTGSVVTRLSEHDACVRDVSWHPYQDNIISSSWDGAVRVWEHRQTHPLDEERER
D
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgggctctcagtctagttctgggatgtccggcggtcggggctccagtggcaaccctgac
cagtctgaagcggaatccaaccagagcagcagcagtaataacagtaacagcagtagaagt
cgcagatcggctgaggggcagcagggtgacaggcagtcaacagcagaggaggacgtcgat
ttagctcaagtgctggcttacctattgaggaggggccaggtgaggctggtccatgggagt
ggagcaacaggcctgcagctcgtccagtcgtattcggactctgacgaggacagcgatggg
gcctgggaggggcgtctaggagaccgttacaaccctcccgtggattcccagccagacact
caggagttggaccggagtgaaatccggactcagatcctcttgaccacggcctcatctgac
ttgaaaggcaggcaaagcttcacccacatgctaacagagagggaacaaggccgatgtcga
ggctccagtttttctcacggagagtgtagtcgcattcgctcacatttcctgcccaatcat
gtgacacacaaggacacataccagcagaaagcgttctgtggtgtgtacagtgatgatggc
aacatgttcctctctgcctgccaagaccagaacatccgtttgtatgacaccagtagcggg
cgctttaacctgaagcagactgtgaaggccagggacgtcggctggagcgtgctggacgta
tgcttcacccccgactcccacaacgtgctctactccagctggtctgattacattcatgtc
tgcagtgtagatggagacagtgaaacccataccgccctggacctcaacccagacgagagg
aggttctgtgtcttctctctggctgcctccacagacggaaaagagatccttggaggagca
aatgatggctgcctctacgtctttgatcgtgaacagaataggagaacccttaagattgat
gctcacgaggatgacgtaaacgcggtggcttttgctgacagctcgtcccagctgctgttc
tcgggcagcgacgacgcgctctgcaaggtgtgggacaggcggacgctgcgggaggacaga
ccccagcccgtgggccagctgtctggacacagagacggcatcaccttcatacacagcaag
ggcgatgcacgttatctgatcagtaactccaaggaccagtccatcaagctgtgggacgtg
aggaagttctcccccaaggagggcctggcggcctcgcggctggccgttacccagcagaac
tgggactaccgctggcagcaggtgccccagagagccctgaagagacacaagctgaccggc
gacacctcggtgatgacctacaggggtcacggcgttctgcacacactcatacgctgccgt
ttctccccggagttcaccaccggacagaggttcatctacaccggctgctccactgggaag
atcatcgtctatgacgtgctgacgggcagcgtggtgaccagactctctgagcatgacgcg
tgtgtgagggacgtcagctggcatccctaccaggacaacatcatcagcagctcctgggac
ggagcagtgcgtgtttgggagcacaggcagacccacccactggatgaggagagggagagg
gactga

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