Salvelinus sp. IW2-2015 (Arctic char): 111953445
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Entry
111953445 CDS
T05762
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111953445
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Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_9
LRR_13
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
111953445
NCBI-ProteinID:
XP_023828473
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All DBs
Position
LG27:complement(14088006..14195522)
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AA seq
1947 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQNVPDEILRYSRSLEELLLDANQLRDLPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKAFEIADFSGNPLSRL
PDGFTQLRGLAHLALNDVSLQTLPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLD
LGSNELEVLPDTLGALPKLRELWLDRNQLSSLPPELGNLRRLVCLDMSENRLEELPSELS
GLLALTDLLLTQNLLEVVPDSIGSLKQLSILKVDQNRLTHLSDSIGECENLTELVLTENL
LQTLPRSLGKLKKLTNLNADRNRLGSVPDELGGCASLNVLSLRDNRVAKLPAQLADATEL
HVLDVAGNRLQNLPFALANLNLKAMWLAENQSQPMLKFQTEDEESTGEKVLTCYLLPQQP
SSSLENLLQNSVDDSWTDSNLNRVSVIQFQEETTKQEAEDDEAAAERRGLQRRATPHHSE
LKVMKKGIEERRNEAYTSRADGETESPGAEEKRLSDLSNQSHDSAASNSTASANSHEERR
GLMTTDLVGGRGPQEEEELDEMEVEYVEPTVHFAEEPVYRGGDENGDDEEGEDGVPHSYE
EEQQRPQFPTEKQRLIRKDTPHYKKNFKITKLPKPEAVAALLQGFSPDAHLGQHPASHHT
APEEEEEEEEEEEEEEGEECMVTPQRHNRIEEPELEDRSLLHANSSLQPVKGVSFDQVNN
LLIEPARIEEEEHNLTILRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEDGPAARAGV
KVGDKLLEVNGVALQGAEHHTAVEALRSSGTAVSMSVIREHMVEPENAITTTPLRPEDDY
FPRERRASGLPFCMEASSPAGPRHRRSACLVRNDKGLGFSIAGGKGSTAYRTGDLGIYIS
RIAEGGAAHRDSTLRVGDRVITINGVDMTEARHDQAVALLTGTSPTIALLVERDQAEPGT
AGGSPGLSRARAHSPPPPEPSDSPDQEEGNDDSPHGTHLSRPLQDEYPIEEVMLVKAGGP
LGLSIVGGSDHASHPFGISEPGVFISKVIPHGLACQSGLRVGDRILEVNTIDLRHATHQE
AVKALLSNKQEIRMLVRRDPSPPGMQEIVIQKQTGEKLGISIRGGAKGHAGNPFDATDEG
IFISKVSSSGAAARDGRLLVGMRILEVSNHSLLGMTHTEAVRVLRAVGDTLFMLVCDGFD
PGNAAAIEASPGIIANPFAAGIVRKNSMESISSIDRDLSPEEMDILQKEVEVARETSQWE
REEVERMRLEREEATRLLEEETENLGTGPLNLDYRTLAALPTTALQKVNRAPSTEPPRTD
SPIRDAPYSPSTQPPSAHSSTSSLCAGRETRFASIHFPPTALPAKNNSPLSPYETRPGSI
QPLSRGGGRPSTSPGTPDGHSRDGHSSPNPFQHGPSPINSQTSLQPRAPSPDTIDEFSLN
PKQAYKAFAAVPHSLAMLEPPLQDLYGQRNNVHSNLPSPSPEPELNNEVFEDKVEGDGGL
GGGLAAPVSPRPSLSSDRRDYLSLAAVPRLSRASMDMVVKTPSPGGRDSPEQRSFRDRQK
YFEIDMKQQTPDSKPKGRVSLVGADDLKKMREEEERRFEQRAREYLMDDDDEEEDDLVKQ
MGVLKATGKVLLDGVEYKVEPVATPPRHYNTPPSYSATPPSYCGSSGPSSVDGKGDSQRN
SLEESFRLDQQRPNSMTGLIPVYPGESGAPIRTAKAERRQQERLRMQSPELAPAGDKDLS
PAEKRALEAEKRAMWRAARPYGLEEDVRQYEQDLAKRLYQSRVRASQGTVPPPQPQNAAA
SSAASQLRMKSLEQDALKAQMVIAKSREGKKRGTLDQLAESPSPAPTPSPTPLEDFSPRG
VTSPGRLSLSEKKFDYRQFAAIPSSKPVYDIQSPDMVDDFQFIDDGSSNPVPAEVPTATS
TLEEMALYRNKRKLRQGRRSLETAVPT
NT seq
5844 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccctttgtggcgctgtaaccgccacgtcgagtcsgtggacaagcga
cattgtaatttgcaaaatgtccccgacgagatattrcgctacagccgcagtctggaagag
cttctcctcgacgccaaccaactcagagatttacccaagcctttctttagacttctgaac
ctgcggaagctgggcctgagtgacaatgagatccagaggctccctcctgaggtggccaac
ttcatgcagctggtggagctcgacatctccagaaacgacattcctgagatccccgagagc
attaagttctgcaaggcgttygagattgcagacttcagtggaaaccccctctccaggttg
cctgatggtttcactcagctgcgagggctcgcccacctggccctcaacgacgtgtcactg
cagacactgcccaacgacataggaaacctggccaacctggtgacgctggagctcagggag
aacctgctcaagtccctgcccacgtcgctctctttcctggtgaaactggaacagctggac
ctgggcagcaatgaactggaagtgttgccagacacacttggtgctctccctaagctacgg
gagctttggttggaccgtaaccagctctcctcattaccaccagagctggggaacctgcgg
aggctggtgtgtctggacatgtcagagaaccgcctggaggagttgccctcggagctgagc
ggcctgctggccctcactgacctgctgctcacacaaaacctcctggaggtggtccctgac
agcataggctctctgaagcagctgtccatcttgaaagtggaccagaaccgactgacccac
ctgagcgactccataggagagtgtgagaacctgacygagctcgtgctgaccgagaacctc
ttacagactctgcctcgctcgctgggcaagctgaagaagctgaccaacctgaatgcggac
cgcaaccggctgggcagcgtgcccgatgagctgggcggctgcgccagcctcaacgtgctc
tccctcagggacaaccgtgtggccaagctgcctgctcaactggccgacgccaccgagctc
cacgtgctagacgtggcagggaacaggttacagaacctcccgtttgccctggccaacctc
aacctgaaggccatgtggctggcagagaaccagtcccagcccatgctcaagttccagacg
gaagatgaggagagcaccggggagaaggtgctcacctgctacctgctaccccagcagcct
tcctctagcctggagaacctgctccagaacagtgtggacgacagctggacagacagcaat
ctgaaccgcgtgtcagtcatccagttccaggaggagaccaccaagcaggaggcggaggac
gacgaggcggccgcggagcgcaggggtctccagcggcgggcgacaccacaccacagtgag
ctgaaagtgatgaagaaagggattgaggagaggaggaatgaggcctacacttccagagct
gatggagagacggagtcccctggtgctgaggagaagcggctgagcgatctgtccaatcag
agccacgactctgcggcgtccaacagcacggcctcggccaactcccacgaagagaggcgg
ggcctgatgaccacagacctggtgggtgggcgtgggccccaggaggaggaggaactagat
gagatggaggtggagtacgtagagcccacggtgcactttgcagaggagcctgtgtaccgy
ggtggggacgagaatggtgacgatgaggagggcgaggatggggtcccacacagctacgaa
gaggaacaacagaggccccagttccccacggagaagcagcgtctgatcaggaaggacacg
ccgcactacaagaagaacttcaagatcaccaagctgccaaaacccgaggcggtggccgcg
ttactgcagggcttcagccccgacgctcacctgggccaacaccccgcctcgcaccacact
gcccctgaggaggaggaggaggaggaggaggaggaggaggaggaggaaggggaggagtgt
atggtaactccacagcgccacaacaggatagaagagccagagctggaggataggagtctg
cttcatgccaactcctccctgcagccggtcaagggggtgtcatttgatcaagtcaataat
ctgctgattgagcctgctcgaattgaggaggaagagcacaacctgaccattctacggcaa
actgggggtctgggcatcagcatagccggaggaaagggatccacaccctacaagggggat
gatgagggcatcttcatctccagggtgtctgaggacggacctgcggcccgggctggggtc
aaagtgggagacaaactcctcgaggtgaacggcgtggccctccagggggcggagcaccac
acggcggtggaagccctgcgcagctcgggcaccgccgtctccatgagcgtcatccgggag
cacatggtggagccggagaacgccatcaccaccacgccgctgaggcccgaggacgactac
ttcccccgggagagacgggccagcgggctgcccttctgcatggaagccagctcccccgca
ggcccccgacacaggcggtctgcctgcctggtccgcaacgacaagggcctgggcttcagc
atcgccgggggcaagggttccacagcttaccgcacgggggacttggggatctacatctcc
cgaatcgcagagggaggggcggcccaccgagacagcacgctccgcgtcggggacagggtc
atcaccatcaatggtgtagacatgacagaggccaggcatgaccaggcagtagcgctgctt
accggcacctcccccaccatcgccctcctggtggagcgcgaccaggccgagccgggcacc
gcagggggctccccgggcctgtcccgcgcccgcgcccactcccccccgcccccagagccc
tcrgactcgcccgatcaggaggagggcaacgacgactcgccccacgggacccacctaagc
cggccgctgcaggacgagtaccccatcgaggaagtgatgttggtgaaggcgggcggccct
ctgggactgagcatcgtgggaggcagcgaccatgccagtcatccgttcggcatcagcgag
cctggtgtcttcatctcgaaggtgatcccgcatggcttggcgtgtcagagtgggctgcgg
gtcggggacaggatactggaggtgaacaccatcgacctgcgccacgccacccaccaggag
gctgttaaagccctgctctccaacaaacaggagatccgcatgctggtgcgcagggacccc
tcaccgccggggatgcaggagatagtgatccagaagcagactggagagaagctgggcatc
agcatacgtggcggtgccaaaggccacgctggcaaccctttcgacgccaccgatgagggc
atcttcatatccaaggtgagctccagtggtgcagcggccagagacggccgtctgctggtg
ggcatgcggatcctggaggtgagcaaccacagcctgctgggcatgacccacacggaggcc
gtgcgcgtmctccgcgccgtgggagacacactgttcatgctggtgtgtgacggcttcgac
ccaggcaacgctgccgccatagaggcgtcgccgggcatcattgccaacccctttgcggcg
ggcatcgtgcgtaagaacagcatggagagcatctcctctatagaccgagacctgagtcct
gaggagatggacatcctacagaaggaggtggaggtagcgcgagagacgtcccagtgggag
agagaagaggtggagcgcatgcgcttggagcgtgaggaggctactcgcctgctagaagag
gagaccgagaacctgggcactggacctctgaatctggactaccggacgctggccgcactg
cccaccaccgctctgcagaaggtcaacagggcaccctccactgagccccccaggacagac
agtcccattagagatgccccctactcacctagcacacaaccgcccagtgctcattcctcc
accagctccctgtgtgcaggcagggagacccgcttcgcaagcattcatttcccccccact
gcactgcctgccaagaataactcgccattgagtccctatgagacgaggccgggttccatc
cagccactctcccgtggtggcgggcggccaagcacctcgccaggcactccggacgggcac
agcagagacgggcacagcagtcccaaccccttccagcatggcccctcccccatcaactcc
cagacctctctgcagcctcgtgccccctcccctgacacgatcgatgagttctccctgaac
cccaagcaggcatacaaggcgtttgccgccgtgcctcactcgctggccatgctggagccg
ccgctgcaggacctgtatggccagaggaacaacgtccactccaacctgccttctccttct
ccagagcctgagctgaacaacgaggtgtttgaggataaggtagagggggacggaggacta
ggtggaggtctggcagcccccgtctctccccgaccctccctctcctctgaccgtcgggac
tatttgagtctggcagcagtgccacgcctctccagagcctcaatggacatggttgtaaag
actccatctcctgggggcagagacagcccagagcagcgctccttcagggacagacagaag
tactttgagatcgacatgaagcagcagacgcctgacagcaagcccaaaggccgcgtgtcc
ctggtgggagcagatgacctgaagaagatgagggaggaggaagagaggagattcgagcag
cgggcgcgggagtacctgatggatgacgatgatgaggaggaggacgacctggtgaagcag
atgggagtgttgaaggccacgggcaaggtgttgctggatggggtggagtacaaggtggag
cctgtggccacgccccccaggcactataacacgccccccagctacagcgccacgccccct
agctactgtggcagctcagggccctcgtcagtggatggtaaaggagactcccagaggaat
tccttagaggagagcttcaggttagatcagcagcggcccaactccatgactggtctgatc
ccagtgtaccctggagagtcgggggctcccatccggacggccaaggcagagcggaggcaa
caggagcggctgaggatgcagagtccagagctggccccggccggagacaaggacctgtcc
cccgccgagaaacgggctttggaggccgagaagagagccatgtggagggcagcaaggccc
tatggcctagaggaggatgttaggcagtatgagcaggacctggctaagaggctctaccag
tcgcgagtgagggcgtctcagggcaccgtgccgcctcctcagccccaaaacgctgccgct
tcctccgctgcctcccagctcaggatgaagtctctggagcaggatgctttgaaggctcag
atggtcatcgctaagtctcgggagggaaagaagcgtggcacactagaccagctggccgag
tcaccctcgcccgcccccacgccatcccccacccctctggaagatttcagtcccagagga
gtgacgtcaccaggcagactgtccctgtcggaaaagaagtttgactaccgacagtttgct
gccattccttcttccaaacccgtatacgacatccagtcccctgacatggtcgacgacttt
cagttcattgacgacggctccagtaaccccgtgcccgctgaggtgcccactgccacctca
acgctggaggagatggccctctacagaaacaagcgcaagctgaggcagggccgccgcagc
ctggagaccgccgtgcccacataa
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