Salvelinus sp. IW2-2015 (Arctic char): 111953457
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Entry
111953457 CDS
T05762
Name
(RefSeq) acetylcholine receptor subunit beta
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111953457
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111953457
Ion channels [BR:
salp04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
111953457
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
111953457
NCBI-ProteinID:
XP_023828516
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Position
LG3:25098190..25124259
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AA seq
495 aa
AA seq
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MRALDLLLLLCCLCGLYAVGGASEGEKQLIKDLFNNYNLKVRPAASPGAKVVVRIGMILS
SFVSLNMKAEEMSTIVIMNLEWTDHRLSWKPKDNDGIEVMRLPAGKVWLPDIVLINNNDG
VFDVALHVAVQAYSSGRVTWSPPALFCSSCGVKVTYFPFDWQNCTMVFKSYTYDSSEVDL
QYALDDQGKEIKEIQYDGGFSESGEWYIRHQPSRKNEIREDLYEDITFYLIIERKPLYYV
FNIIIPCILLTCIAIFNFYLPPDAGEKMGLSINVLLTLTVFLLLLADKVPETSLGVPIIV
NYLMFTMILVTVSVILSVVVLNLHHRSPSTHHMPMWVRKIFIHMLPPYLGMLRPKVEMPL
SLDQPPRREKNNMTISRAADEYFIRKPNTCFLFPKPNRYQSEGMCTDLRKFIDGPSHYLT
LPPELKTAIEAIIYIAEQLQAEKDFAALREDWQYVAMVVDRMFLWIFVVFTTVGTLGIFA
NASFNHTPSDPFKYP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgagggccctggacttgctcctgctgttatgttgcttgtgtggcctgtacgcggtggga
ggtgcgtcggagggggagaagcagctgattaaagacctgttcaacaactacaacctgaag
gttcgccctgcggcctcacctggcgccaaggtggtggtccggattggcatgatcctctcc
tccttcgtcagcctgaacatgaaggcagaagagatgagcacaatcgttatcatgaacctg
gagtggacagaccaccgtctctcctggaaacctaaagacaatgacgggatcgaggtgatg
agacttcctgctgggaaggtctggctgcctgacatcgtcctcatcaacaataatgatggt
gtgtttgatgtggccctccatgtcgctgtccaggcctatagtagtgggagggtgacctgg
tctccccctgccctcttctgcagttcctgtggggtcaaggtgacatacttcccatttgac
tggcagaactgcaccatggtgttcaagtcttacacctacgactcatcagaggtggacctg
cagtacgctctggatgaccagggcaaagagatcaaagagatccaatatgacggaggcttc
agtgagagtggtgaatggtacatccgccaccagcccagcaggaagaatgagatccgtgag
gacctgtatgaagacatcaccttctacctgatmatcgagaggaagcctctctactatgtc
ttcaacatcatcatcccctgtatcctcctcacctgcatagccatcttcaacttctacctg
ccgcccgacgctggtgagaagatgggtctgtccatcaacgttctgctcaccctgactgtg
ttcctgctgctgctagctgacaaggtccccgagacctccctgggtgtccccatcatcgtc
aactacctcatgttcaccatgatcctggtcaccgtctcagtcatcctcagtgtggtggtc
ctcaacctgcaccaccggtccccttccacacaccacatgcccatgtgggtccgcaagatc
ttcatccacatgctgcccccctacctgggcatgctgcggcccaaggtggagatgcccctc
tccttggaccagccccccaggagggagaagaacaatatgactatcagccgcgctgccgac
gagtacttcatacgcaagcccaacacctgcttcctctttcccaaacccaacaggtaccag
tctgagggcatgtgtactgacctgaggaagttcatcgacgggcccagccactacctcact
ctgcctccggagctcaagactgccatcgaggccatcatctacatcgctgagcagctacag
gctgagaaggactttgccgctctgagggaggactggcagtatgtagccatggttgtggat
cgcatgttcctgtggatctttgtggtcttcactactgtgggaaccctgggcatctttgcc
aacgccagcttcaaccacacccccagcgacccctttaagtacccctaa
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