Salvelinus sp. IW2-2015 (Arctic char): 111953506
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Entry
111953506 CDS
T05762
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111953506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111953506
03036 Chromosome and associated proteins [BR:
salp03036
]
111953506
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111953506
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111953506
PBAF complex
111953506
GBAF(ncBAF) complex
111953506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
111953506
NCBI-ProteinID:
XP_023828595
LinkDB
All DBs
Position
LG27:complement(14547403..14603640)
Genome browser
AA seq
553 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYSGSPTVRPGL
PTPVMEPSRKRPAPSQQNQQQQXVQNRARKKPVGFPGANEMPARQMDMRDAQSDPTLGSN
AKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKL
RLYISNTFNPAKPDADDSDGSIASWELRVEGKLLDDPGKLKRKFSSFFKSLVIELDKDLY
GPDNHLVELLTSKAKRFSLPKDNILKGSRARLLVESWHRTPTTQETDGFQVKRPGDVSVR
CTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDK
YFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLK
SQMSSFLLSTANQQEIASLDNKVGQPHRKDSQSQLPKMTLKIHETIESINQLKIQRDFML
SFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEERRAAFYHEPWSQEAVSRYFYSKIQQR
RQELEQALAVRNT
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggagacggcggggggagcgcgcaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggaatgccatctggagctaggatgccccaccagggt
gcccccatgggcccccccgggcccccgtacagtgggagccctacggtgcggcccggcctg
cccaccccggtcatggagcccagccgcaagagacctgccccctcccagcagaaccagcag
cagcagawcgtacagaaccgggccagaaagaagccagtgggattccctggagccaatgag
atgccagcgaggcagatggacatgagagatgcccaatcagatccaacgctcggatcaaac
gccaagagaaggaaaatggcagacaagattcttccacagaggatccgtgaactggtccct
gagtcacaggcttacatggacctgctggccttcgaacgtaaactggaccagaccatcatg
cgtaaacgggtggacatccaggaagccctgaagagacccatgaagcaaaagcgtaaactg
aggctgtacatctccaacaccttcaaccctgccaagcccgacgctgacgactcggatggc
agtattgcatcatgggagctgcgggttgaggggaagctgctggatgatcctgggaagctg
aagaggaaattctcctctttcttcaagagcctggtgattgagctggacaaagacctatac
ggtcctgacaaccaccttgtagagctgctgaccagtaaagcgaagcgattcagccttcca
aaagacaacatactcaaagggtcgagagcaaggctgctcgttgaaagttggcaccgcact
cccaccacccaggagacagacggcttccaggtgaagcggccaggggacgtgagcgtgcgc
tgcacactgctgctaatgctggactaccagcccccccagtttaaactggaccctcgcctg
gcccggctgctgggtatccacacccagacccgctcctgtatcatccaggccctgtggcag
tatgtcaagaccaacaagctgcaggactcccatgacaaggagtacatcaactgtgacaag
tactttcagcagatctttgactgcccgaggctcaagttctcggagatcccccagcgtctc
accaacctcctcctaccccctgaccccatcgtcatcaaccacgtcatcagtgtggaccct
aacgaccagaagaagacggcatgctatgacattgacgtggaggtggaggaccccctgaag
agccagatgagcagcttcctgctctccaccgccaaccagcaggagatcgcctcattggac
aacaaggtgggacaaccacacaggaaggatagccaatcacaattacccaagatgacttta
aagatccatgagaccattgagtccatcaaccagttgaagatccagagggactttatgctc
agcttctccagggatcctaagggctacatccaggactggctcaagtcccaaagcagagac
ctgaagctgatgacagacgtggtggggaacccagaggaggagaggagggcggcgttttac
cacgagccctggtcccaggaggccgtcagtcgttacttctacagcaagatccagcagagg
agacaggagctggagcaggccttggccgtgaggaacacctaa
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