Salvelinus sp. IW2-2015 (Arctic char): 111953533
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Entry
111953533 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-6-like
KO
K06589
integrin beta 6
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04510
Focal adhesion
salp04512
ECM-receptor interaction
salp04810
Regulation of actin cytoskeleton
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111953533
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111953533
09142 Cell motility
04820 Cytoskeleton in muscle cells
111953533
04810 Regulation of actin cytoskeleton
111953533
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111953533
04515 Cell adhesion molecules [BR:
salp04515
]
111953533
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
111953533
Cell adhesion molecules [BR:
salp04515
]
Integrins
Integrin beta subunits
111953533
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
PSI_integrin
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
111953533
NCBI-ProteinID:
XP_023828651
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Position
LG27:34525215..34531998
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AA seq
624 aa
AA seq
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MGIAVLLVLILRHWINNVEGTCSVGSAVTCDECLQLGPHCAWCTQENFTDSFLISERCDT
PYLLQERGCPQDQVEFPVTNSEVLRDQPLGKKTGNTNITQISPQKMALKLRTGSEVTFQI
SVQQTEDYPVDIYYLMDLSASMIDDLEMIKDLGSTLSKEMAKLTSKFRLGFGSFVEKPVL
PFIKITPGELDNPCRSVDESCLPTFGYKHVLPLTSSTEKFNNIITNQRVSANIDLPECGF
DAIMQAAVCGDKIGWRNDSMRLLVFVSDADSHFGMDSKMSGIVVPNDGECHLDSNNEYSM
AAHLEYPTLGQLMDKLVENNILLIFAVTENQKHNYENYANFIPGATVGVLESDSRNILEL
IVTAYKELRSRXELEVLGDTEDLQISFTAICQDGTVLPGQKRCSNVKAGDTVSFNVTVEL
SECLDGPQRFLIKPVGFQDPLEIDLESLCSCACHQTPEPNSSHCSLGRGSLECGSCLCDP
GYMGSKCECTEESXQSSNCKASGAAESCSGQGECYCGQCVCHPSSFGRVYGAYCECDDFS
CVRFRGLLCGGHGDCDCGECVCQAADGDTVTRSSSRDTCVSEDGVLCSGRGKCVCGKCVC
SMPGASGXTCERCPTCGDSCSSAR
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggggattgctgtacttctggtcctgattcttcggcattggatcaacaacgtggaggga
acatgttcggttggcagtgcagtgacttgtgacgagtgtctccagcttggtccccactgt
gcatggtgcacacaagagaatttcacagactcgtttttaatcagtgagcgatgtgacaca
ccgtacctcctccaagagagaggctgtccccaggaccaggtagaattcccagtgaccaac
tcagaggtcctccgggaccagcctctcgggaagaagacaggaaataccaacatcacacag
atatcaccacagaagatggccctcaaactcagaactggcagtgaggtgaccttccagatc
agtgtgcagcagacagaagactaccctgtagacatctactacctgatggacctctcagcc
tccatgattgacgacctggagatgattaaagacttgggctccaccctgtccaaggagatg
gcaaagctcaccagtaaattcagacttggatttgggtccttcgttgagaaaccagtcctc
ccgttcattaagatcactcctggagagctggataacccttgtaggagtgtggatgagagc
tgtctgccaacgtttggatacaagcacgtcctacccctcaccagcagcacagagaagttc
aacaatatcatcaccaaccagcgtgtgtctgccaacatcgacctgccggagtgtggcttc
gatgccattatgcaggctgctgtctgtggggacaagataggctggaggaacgactccatg
cgtctgctggtgtttgtgagcgacgccgactctcactttgggatggacagcaagatgtca
ggcatcgtcgtccctaacgacggagagtgccatctggacagcaacaatgaatactctatg
gctgcccatctggaatacccaactctgggacagctgatggataaactggtggagaacaat
atcctgcttatattcgctgtgacggaaaatcagaaacacaactacgagaactatgcaaat
ttcatacctggtgccacggtgggggttctggaatcagattcaaggaacatcctggaactg
attgtgacggcgtataaagagctgcgctctagataagagctggaggtactaggagacacg
gaggatctacagatctccttcacagcgatctgtcaggatggcacggtactacctggacag
aaacgatgctccaacgtcaaagctggagacacggtctccttcaaygtgactgtagaactc
tctgagtgtctcgacggtccccagcgtttcctcatcaaaccggtgggctttcaggacccc
ctggagatagacctggagtcactgtgctcctgtgcctgtcaccagacccccgagcccaac
agcagccactgcagcctgggccgtggatctctggagtgtggctcctgtctgtgtgatcca
gggtacatgggttccaagtgtgagtgtacggaggagagcgyccagagcagtaactgcaag
gccagtggcgctgcggagtcctgtagcgggcaaggggagtgttactgcggccagtgtgtg
tgtcacccgtctagtttcggacgcgtctacggggcctactgcgagtgtgacgacttctcg
tgtgtgaggttccgaggkttactctgtggaggtcacggggactgtgactgcggcgagtgt
gtgtgtcaagcggctgatggggatactgtaactcgcagcagcagcagggacacgtgtgtg
tcggaggacggagtgctgtgcagcggacgggggaagtgtgtgtgcgggaagtgtgtgtgt
tccatgcccggagcctctgganacacctgtgaaaggtgccctacctgtggagactcctgt
agctctgctaggtaa
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