Salvelinus sp. IW2-2015 (Arctic char): 111953616
Help
Entry
111953616 CDS
T05762
Name
(RefSeq) trifunctional purine biosynthetic protein adenosine-3 isoform X1
KO
K11787
phosphoribosylamine--glycine ligase / phosphoribosylglycinamide formyltransferase / phosphoribosylformylglycinamidine cyclo-ligase [EC:
6.3.4.13
2.1.2.2
6.3.3.1
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00230
Purine metabolism
salp00670
One carbon pool by folate
salp01100
Metabolic pathways
Module
salp_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
111953616
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
111953616
Enzymes [BR:
salp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.2 phosphoribosylglycinamide formyltransferase 1
111953616
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.1 phosphoribosylformylglycinamidine cyclo-ligase
111953616
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
111953616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GARS_A
Formyl_trans_N
GARS_N
AIRS_C
GARS_C
AIRS
ATP-grasp
ATP-grasp_3
CPSase_L_D2
RimK
ATP-grasp_4
Dala_Dala_lig_C
ATP-grasp_2
Motif
Other DBs
NCBI-GeneID:
111953616
NCBI-ProteinID:
XP_023828768
LinkDB
All DBs
Position
LG27:28590903..28626302
Genome browser
AA seq
1021 aa
AA seq
DB search
MAERVLVIGSGGREHALAWKLAQSPHIQEVLVAPGNAGTANCGKISNSEVSVSNHSILAQ
FCKEHSVGLVLVGPEVPLAAGMVDDLQAVGVQCFGPSAKAAQLEASKSFSKAFMDRHGIP
TANWCSFTDPQEACSYIRTASFPALVVKASGLAAGKGVIVAKDQEEACQAVLDIMKDKMF
GSAGETVVVEELLEGEEVSCLCFSDGCTVSPMPPAQDHKRLQDGDLGPNTGGMGAYCPTP
QVSQELLQQISETVLQKTVDGMKEEGAPYVGVLYAGLMLTKQGPKVLEFNCRFGDPECQV
LMPLLKSDLYEVLQSTLQGKLASSAPVWHQDSSAVTVVMASPGYPGSYKKGVTITGLSQV
EEMGVHVFHAGTALKEGGVVSSGGRVLTVTAVRSSLEMALHAANRGVAAVGFLGAVYRRD
IGHRAITHLTQHSRGLTYKDSGVDIAAGNRLVDMIKPFAKATSRSGCNAELGGFAGLFDL
KAAGFIDPILVSGTDGVGTKLKIAQACQQHSTLGQDLVAMCVNDVLAQGAEPLFFLDYFS
CGRLDVGVASAVIGGVAEACGLAGCALLGGETAEMPGVYGPGEYDLAGFCVGAVERGALL
PRLGDICDGDLLIGVAASGVHSNGFSLVQKVLERAGVTYSSPAPFGKPGQTVGEVLLTPT
KIYSRLLLPILRSGAIKGYAHITGGGLLENIPRMLPQELSVDLDASRWIIPPVFSWLQEE
GGLCEEEMGRTFNCGLGAVLVVAFPDAQRVLRQLQAHEDAWIVGSLAHKQPGAEPVVIRN
LKHSLRLGPSPCVVDQGPMQNGGSQGDNSSTVPRKRTRVGVLISGTGTNLQALMEQAKRT
SSSAEIVVVISNRPGVLGLKRASLAGIQTRVVDHKLYGSRAEFDGTIDRVLEEFDVEVVC
LAGFMRILTGSFVRKWKGKLLNIHPSLLPSFKGVNAQKQALQAGARVTGCTVHFVAEEVD
AGAIIAQEAVPVLMNDTEESLSDRIREAEHRAFPAALELVAGGGVSLGDDGRIFWNPNAQ
G
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcgggtgctggtgattggcagtggtgggcgggaacacgccctggcatggaag
ctggcacagtcaccacacatccaggaggtcctggttgcaccggggaatgctggcaccgcc
aactgtggaaagatctccaactctgaggtgtctgtgagtaaccactctatcctggctcag
ttctgtaaggagcatagtgtggggctggtgttggtagggcccgaggtgcctctggcagca
ggcatggtagatgacctgcaagcggtgggggtccagtgtttcggcccttcggcgaaggct
gcccagctggaggccagtaagagtttctccaaggcctttatggaccgtcacggcatcccc
acagccaactggtgctccttcaccgacccccaggaggcctgcagctacatccgcacggcc
agttttcctgctctggtggtgaaggccagtggcctggctgcagggaagggtgtcattgtg
gccaaggaccaggaggaggcctgccaggctgtgctggacataatgaaggacaaaatgttc
ggctctgctggggaaactgtggtggtggaggaactgctggagggagaagaagtgtcttgt
ctgtgtttcagtgatggctgcactgtgtcccccatgcccccggcccaggaccacaaacgc
ctgcaggacggcgacctgggccccaacaccggcggcatgggggcctactgccccacccct
caggtgtctcaggagcttttgcagcagatcagcgagactgtcctgcagaagactgtggat
ggcatgaaggaggagggtgccccctatgtgggtgtgctgtacgctgggctgatgttgacc
aagcaggggccaaaggtcctggagttcaactgtcgcttcggcgacccagagtgtcaggtg
ctgatgcccttgctgaagagtgacctgtatgaggtgctccagagcaccctgcaggggaag
ttggcatccagcgcccctgtgtggcaccaggacagctctgcagttactgtggtcatggcc
agccctggctaccccggctcctataagaaaggtgtcacaatcacaggtctgtctcaggtg
gaggagatgggggtgcatgtgtttcacgctggcacggcgctgaaggaagggggtgtggtc
tccagcggggggcgtgtcctcactgtcaccgctgttaggtcgtccctggagatggccctg
catgcagccaatcggggcgtggccgccgtggggttcctgggagctgtgtaccgacgtgac
atcggtcaccgagccatcacccacctcacccagcacagcagaggcctaacctataaggac
agcggagtggacatcgctgcgggaaaccggctggtagacatgatcaagccatttgccaag
gccacctctcgctcagggtgtaacgctgagctcgggggcttcgccggcctctttgacctc
aaagctgcaggcttcatcgaccccatcctggtgtctgggacagacggcgtagggaccaag
ctcaagattgctcaggcatgccagcagcacagcaccctgggacaggacctggtggcaatg
tgtgtcaacgacgtgctggcccagggggcggagcctctcttcttcctggactacttttcc
tgtggccgtctggatgtgggcgtggcctccgctgtgattgggggcgtggccgaggcctgc
gggttggcgggctgcgctctgctgggcggcgagactgcggagatgcccggtgtgtacggc
cccggagagtacgacctggcagggttctgtgtgggggcggtggagaggggcgccttgcta
cccaggctgggggacatctgcgacggggacctgctcatcggggtggccgcctcaggggtg
catagcaacggattcagcctggtccagaaggtcctggagagggcaggagtcacctacagc
tctcctgcaccttttgggaaacctggacaaactgtgggtgaggttctcctgacgcccact
aagatctacagccgcctgctcctgccaatcctgcgcagcggcgccatcaagggctatgcc
cacatcactgggggcggcctattggagaacatcccccgaatgctgcctcaggaactgtcc
gttgacctggacgcatcccgttggatcatcccccctgtgttctcgtggctccaggaggag
gggggcttgtgcgaggaggagatggggcgcaccttcaactgtggccttggggctgtgctg
gtggtggcctttccggacgcccagagggttctgaggcagctccaagcccacgaggatgcg
tggatcgtgggctcgttggcccacaagcagcctggggccgagccggtggtgatcaggaac
ctgaagcacagcctgcgtttaggcccctctccctgcgtagtagaccaggggcccatgcag
aacggagggtctcaaggggataacagcagcaccgtcccccgcaagaggaccagggtgggc
gtcctcatctcaggcacaggcaccaacctgcaggcactgatggagcaggcaaagagaacg
tccagctcagcagaaatcgtggtggtaatctccaaccggccgggggtcttgggcctcaaa
agagcctctctggccggcattcagacacgggtggttgaccataagctgtatggtagccgg
gcagagtttgacggcaccattgaccgcgtgctggaggaatttgacgtggaggtggtgtgt
ctcgctggcttcatgaggatcctcacggggtccttcgtcagaaaatggaaaggaaaactg
cttaacatccatccatccctgctgccctccttcaagggggtgaatgcccagaagcaggct
ctgcaggcgggggcacgggtcaccggctgcaccgtccactttgtggctgaagaggttgat
gccggggccatcattgctcaggaggcagtgcctgtgttgatgaatgatactgaggagagc
ctatcagatcgcatccgggaggcggagcaccgggccttccctgccgccctggagctggtg
gccgggggtggcgtgagcctgggggatgacggacgcatcttctggaacccaaacgcacag
ggctaa
DBGET
integrated database retrieval system
