Salvelinus sp. IW2-2015 (Arctic char): 111953753
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Entry
111953753 CDS
T05762
Name
(RefSeq) CCR4-NOT transcription complex subunit 9 isoform X1
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111953753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
salp03019
]
111953753
Messenger RNA biogenesis [BR:
salp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111953753
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
TPR_IPO11
ADSL_C
Motif
Other DBs
NCBI-GeneID:
111953753
NCBI-ProteinID:
XP_023828989
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All DBs
Position
LG27:32847807..32851384
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AA seq
301 aa
AA seq
DB search
MLATGAAVTTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSCGT
IAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPF
LHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVA
TFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDN
SSPHTRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDPRGIPLPT
Q
NT seq
906 nt
NT seq
+upstream
nt +downstream
nt
atgctggctacaggagcagctgtaaccacggctctggcccaagtggatagggaaaagatc
taccagtggatcaacgagctgtccagcccagagacccgcgagaatgccctgcttgagctc
agtaaaaaacgggagtccgtgccagatttggctccaatgctatggcactcctgtggaact
atagctgctctcctgcaggaaattgtcaacatctacccrtcaataaaccccccgaccctc
accgctcaccagtccaacagagtatgcaacgcattagcacttctgcagtgtgtagcctct
catccagagacaagatcggcatttctggcagcacacattcctctatttctgtaccccttc
ttacacactgtcagcaaaacacgaccatttgagtacctccgactcaccagcctaggagtc
atcggtgccttggtcaaaacagatgagcaggaagtgatcaacttcctgttgacaacagaa
atcattcccctgtgccttcgcataatggagtctggcagtgagctttccaaaacggtagca
acttttatactacagaaaatactccttgatgacacagggctggcatacatttgccaaaca
tatgaacgcttctcccatgtggccatgatacttggcaaaatggttcttcagctctccaaa
gagccctccgctcgtcttttgaaacatgttgtccgctgttacctacgcctgtcagacaac
tccagcccccacaccagagcccgagaggccctccgtcagtgtctaccagaccagcttaaa
gacaccacgtttgcccaggtcctgaaggacgacaccaccaccaaacgctggttggcacag
ctggtgaagaacctacaggaaggccaagtcacagaccccaggggcatccctctgcccaca
cagtag
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