Salvelinus sp. IW2-2015 (Arctic char): 111954026
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Entry
111954026 CDS
T05762
Name
(RefSeq) thyroid receptor-interacting protein 6-like isoform X1
KO
K12792
thyroid receptor-interacting protein 6
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
111954026
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Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
111954026
NCBI-ProteinID:
XP_023829293
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Position
LG3:27029050..27034565
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AA seq
578 aa
AA seq
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MSCPTWLPPKTPGSPERPVPQMSDSGLAVYRQLPKVSSDTRPKYVVYDQNGGGGMATRDM
ASGPTAGPIQHHQEDPGFHPKSNDHYYQPPPQGFEEDQSWNPHMERYQLTHWVTPETLIG
HHSNSDAEIDSLTCMLADQDCHSLNGTQLYDNVPYNKYILGDRYTPSAQPGDASQGEPSM
GFPPQSMDHPTPPNHSYPHQGLQYFPQPDDTDAQVSKPYPQPVPASYTTASTPTGPRFSV
QVKTAQTVTYFQTGRQAEQAYTPPPHRHHALRSLPXNQTGPQGWYPPXPASQAQELHSER
GYKGSAAGFGGRATQCPISNRGPETHESGSAPSSACQPSKQGTAAPRPEDELNQLTKKLV
YDMNHPPTEEYIGRCARCGDKVLDGSDCITMEQVFHVDCFTCVTCHAHLRGQPFYAIDKQ
SHCRSCYISVLERCCMCSKPILDRVLRSMGNAYHPHCFNCVVCGCCLDGVPFTVDATYQN
HCJDDFHRKFAPRCSVCGQAIIPGLGQEETVSIVALDRNFHVNCYVCEECGLLLSAEGEE
RCCYPLDGHILCKGCNAQHILNQTSKSPLTANQLGSHL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtcctacctggctgcctccgaaaactccgggtagcccagagagacccgttccc
cagatgtccgactctggactagccgtgtacagacagctgcccaaggtctcctcggacacc
cggcccaagtatgtggtctatgaccagaacggagggggaggaatggccactagggacatg
gcttctggacccacagctgggcccattcagcaccaccaagaggacccagggtttcaccct
aaatctaatgaccactactaccaaccacctccccaaggtttcgaagaagaccaatcctgg
aaccctcacatggaacgctaccagcttacgcactgggtaactcctgagacgctcattgga
caccactccaacagtgatgcggagattgactcactcacctgcatgctggctgatcaggac
tgccattcactaaacggcacgcagctgtacgacaatgtgccttacaacaaatacatcttg
ggggaccgctacacaccctcagcccagccaggagacgcatctcagggagagccatctatg
ggtttcccacctcagtccatggaccatcctacacccccaaaccacagttatccccaccag
ggtctccagtacttcccccagccagacgacaccgacgcccaggtctccaaaccctacccc
cagcctgtccctgcctcctacactaccgcctccacccctactggcccgaggttcagtgtc
caggtcaaaacagcccaaactgtcacctacttccagactggtaggcaagctgagcaggct
tacactcctcccccacaccgccatcatgcactgcggtccctgcccaamaatcagactggr
ccccagggctggtaccctccccakcctgcttcccaagcccaggagctgcactctgagagg
ggttacaaggggagtgcrgcagggtttggagggagagctacccagtgccccatatccaat
agaggcccagagactcacgaatcagggtcagcaccaagctccgcctgtcagcccagtaag
caggggacagcagctccgaggccagaggatgagttgaaccagctcactaagaagttggtg
tatgacatgaatcatccccctacagaggaatacattggtcgctgtgcacgttgcggcgac
aaagtccttgacggcagcgactgtattaccatggagcaggtgtttcatgtggattgtttc
acctgtgtcacctgccacgctcatctccgggggcaaccgttctacgccattgacaagcag
agccactgcaggagctgttacattagtgtcctagagcgctgctgcatgtgctccaagccc
atcctggaccgtgtcctycggtccatgggcaatgcctaccacccgcactgcttcaactgc
gtggtgtgtggctgctgcctggacggcgtgcccttcaccgtggacgccacctaccagaac
cactgtwtagacgacttccacaggaagtttgcccctcgctgctcagtgtgtggccaggcc
atcatccctggactgggccaggaggagacggtcagtatagtggcgctggaccgcaacttc
cacgtcaactgctatgtgtgtgaggagtgtggtctgctcctgtcggctgagggtgaggag
cgatgctgttaccccctggacggtcacatcctgtgtaagggctgcaacgcccagcacatc
ctgaaccaaacgtcaaaatctccactgactgctaaccaactaggaagtcacctctga
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