Salvelinus sp. IW2-2015 (Arctic char): 111954041
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Entry
111954041 CDS
T05762
Name
(RefSeq) estrogen receptor-like
KO
K08550
estrogen receptor alpha
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
111954041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111954041
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
salp03310
]
111954041
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
111954041
Nuclear receptors [BR:
salp03310
]
3. Estrogen like
3A. Estrogen receptor
111954041
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Oest_recep
DUF3999
zf-C17orf113
Motif
Other DBs
NCBI-GeneID:
111954041
NCBI-ProteinID:
XP_023829309
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Position
LG28:complement(29256435..29285522)
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AA seq
566 aa
AA seq
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MYPEETRGGGGAAAIDYLEGVYDYTAHAPGLAPLYSSSTASLDAHGPPLDDSLQSLLFVP
STPQLSPFLRHTSLPSLPSQSFYLEISSTPVNRSSVVANQHSVSQEELSSTSDRQEPYTV
AESVSGSGSGPGVGVFEMAKETRYCVVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDYM
CPATNQCTIDRNRRKSCQACRLRKCYEVGMMKGGLRKDRGGRVLQRDKRRGGPAGDNSVQ
EHSKAPPQDSSRNSSFGGGGGGEGRLKIAMPPEQVVFLLQGAEPPALCSSQQLGRPYTEI
TMMTLLTSMADKELVHMIAWAKKIPGFQELSLHDQVQLLESSWLEVLMXGLIWRSIPSPG
KLNFAKDLILDRSEGDCVEGMAEIFDMLLATVFRFRMLKLKPEEFVCLKAIILLNSGAFS
FCYYSVESLHNSPAVQSMLDNITDALIHHISQSGASVQQQSRRQAQLLLLLSHIRHMSNK
GMQHLYSMKCKNKVPLYDLLLEMLDAHRIHSPGKVAQAWGQAKGEPLSTKGSSIGPKQGN
QDTQLRSPGPGVLEYGTTRSDRSPIP
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtaccctgaggagacccgtgggggtggaggggcagccgccatcgactacctggaggga
gtgtatgactacactgcccatgcccctggcctggcccccctctacagttcctccaccgca
tccctggatgcccatggaccccccttggacgacagcctgcagtcccttctgtttgtgccc
tccactccccagctcagccccttcctccgacacaccagcctccccagcctccccagccag
tctttctacctggagatatcctccacacccgtaaacaggtcgagtgtggtagccaatcag
cactcagtgtcccaggaggagctcagcagcacctccgacaggcaggagccttacactgtg
gcggagtcagtgtcaggctcaggttcagggccaggggtcggagtgtttgagatggccaag
gagactaggtactgtgtggtctgcagtgactatgcctctgggtatcactacggagtttgg
tcctgcgagggctgcaaagccttcttcaaaaggagcatccaaggtcacaatgactacatg
tgccctgcgaccaaccagtgtaccatcgacaggaaccgtaggaagagctgccaggcgtgc
cgcctcagaaagtgttacgaagtgggcatgatgaaaggaggcttgcgaaaggaccgcggt
gggcgggttctccagagggataagaggcgtggtggccctgctggtgacaacagtgtccag
gagcacagcaaagcgccccctcaggatagtagcaggaacagcagcttcggtggtggagga
ggaggagaagggcggctcaagatcgccatgcctcctgaacaggtggtgttcctgctgcag
ggtgcggagcctccagccctgtgttctagtcagcagttgggccgtccctacacagagatc
accatgatgaccctgctcaccagcatggctgacaaggagctggtgcacatgatcgcctgg
gctaagaaaataccaggtttccaggagctgtctctccatgaccaggtgcagctgcttgag
agttcctggctggaggtgctgatgatrggactkatttggaggtccatccccagccctggg
aaactaaacttcgccaaggacctgatactggacaggagtgaaggggactgtgtggagggc
atggctgagatctttgacatgctcctggccactgtgtttcgcttccgcatgctcaaacta
aagcctgaggagtttgtgtgtctcaaagccatcatcttgcttaactctggtgccttctcc
ttctgttattactctgtggagtccctccacaacagcccggcggtgcaaagcatgttggac
aacatcactgacgccctcatccaccacatcagccaatcgggagcctcggtgcagcagcag
tccagacggcaggcccagctcctgctcctgctctcgcacatcagacatatgagcaacaaa
ggcatgcagcacctgtacagcatgaagtgtaagaacaaagtgcctctgtatgacctgctc
ctggagatgctggacgctcaccggatccactccccaggcaaggtggcccaagcctgggga
caggccaagggggagcccctctctaccaaaggctccagcataggacccaagcaaggcaac
caagatacccagctcagaagcccaggtcctggggtactcgagtatggcactacacgctct
gaccggagccccattccatga
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