Salvelinus sp. IW2-2015 (Arctic char): 111954143
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Entry
111954143 CDS
T05762
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111954143
04990 Domain-containing proteins not elsewhere classified [BR:
salp04990
]
111954143
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
SALM family
111954143
Domain-containing proteins not elsewhere classified [BR:
salp04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
111954143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
LRR_1
Ig_2
fn3
LRR_5
LRR_9
LRRCT
LRR_14
GP79
Motif
Other DBs
NCBI-GeneID:
111954143
NCBI-ProteinID:
XP_023829411
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Position
LG28:31948494..32044862
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AA seq
803 aa
AA seq
DB search
MDHILCCLLVLGTAVMMAHACPKYCVCQNLSESLGTLCPSKGLLFVPLDLDRRTVELRLG
GNYILRITQQDFANMTDLVDLTLSRNTISYIQPFSFGDLETLRSLHLDNNRLMELGPEDL
RGLVNLQHLIVNNNQLGRISDRTFEDLAPSLEDLDLSYNNLRSLPWDSVKQMVSLHQLSL
DHNLLDFIPEGTFTDLERLARLDLTSNRLQKLPPDPIFARAQDLVLLTTPYTPQLSLSIG
GNPLHCNCEVLWLRRLERDDDLETCASPPSLKGRYFWYVSEEEFVCEAPLITQHTHRMLV
LEGQTASLRCEAVGDPTPTIHWMAPDDRLLGNSSRTAVYRNGTLEILITTSKDYGTFTCI
AANVAGESTASVELSIIQLPHLSNGTSQASQPKSRLSDITGTTRISKGVPKSPPEKVVTV
SEVTAISALVKWTVSKAAPKVKMFQLQYNCSDDEVLIYRMIPASSNAFLVTNLVSGTKYD
LCVLAAWDDTATTLTATNVVGCAQFFTRDDYTQCQSLHSQFLGGTMILVVGGIIVATLLV
FIIILMLRYKATDNEGGGTGGIGKLTSVSATHSQTNGGRLGQNGMPLPLPKPKAKVTIQD
EVVEFKCGSLQSSLTSSSSSSGGSMAGGGSHSPNSTLANMWRQAAPSKPRANLDHLLGAF
NSLELRAAQARGRGDLGEPSSSSSTLVAGGDRPPTDREPLLGHTMDSRLSRVLMLPLDSK
PKRSQSFDMGDCMDTNRQTEKAMASSASTATTPVCSYPRRISSIWTKRSLSVNGMLLQCD
EEGDMGGSKGTFESQEWVMESTV
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggaccacatcctctgttgcctgctggtcctgggaaccgcagtgatgatggcccatgca
tgccctaagtactgtgtctgccagaacctatccgagtccctggggaccctgtgcccctcc
aaaggccttctcttcgtcccgttggacctcgaccggcgcactgtggagctccggctgggt
ggcaactacatcctccgcatcacccagcaggactttgccaacatgaccgacctggtggac
ctgacactcagccgcaacaccatcagctacatccagcctttctccttcggcgacctggag
accctgcgttccttacacctggacaacaaccgcctcatggagctgggtccagaggatctc
aggggcctggttaacctgcagcacctcatcgtcaacaacaaccagctgggacgcatctca
gacaggaccttcgaagacctggccccctccctggaggatctggatctgtcctacaacaac
ctgaggagcctgccctgggactcagtcaagcagatggtctccctccaccagttgagtctt
gatcataacctcctggactttatccctgaggggacctttactgatctagaaaggttggct
cgcctggatctcacctccaaccggctgcagaagctgcccccggaccccatcttcgccagg
gcacaggatttggtgctgttgaccacgccctacacccctcagctgtcccttagcatcggg
ggaaaccccctgcactgtaactgcgaggtgctgtggttgcggcggctggagagggacgac
gacctggagacctgcgcttcccctcccagcctgaaggggcgctacttctggtatgtgagt
gaggaggagtttgtgtgtgaggcgccactcatcactcagcacacccacaggatgctggtg
ctggagggccagacggccagcctgaggtgcgaggctgttggagaccccacccctaccatc
cactggatggcccccgatgaccgtctccttggcaactcatcccgtaccgccgtctaccgc
aacggcaccctggaaatcctcattaccacctccaaggactacggtaccttcacctgcatc
gctgccaacgtggctggagagtccaccgcctctgtggagctgtcaatcatccagctgccc
caccttagcaacggcaccagtcaagcctcgcagcccaagtcccgcctctcagacatcaca
ggcaccaccaggatcagcaagggggttcctaagagcccgcctgagaaagtggtcactgtg
tcagaggtgacggccatttcagctctggttaagtggacagtcagcaaggcagcgcccaag
gtgaaaatgtttcagctccagtacaactgttcggacgacgaagtcctcatctacaggatg
atcccggcctccagcaatgccttcctggtgaccaacctggtgtcggggacaaagtacgac
ctgtgtgtcttggccgcctgggacgacaccgccaccaccctgactgccaccaacgtggtk
ggctgtgcccagttcttcacccgcgatgactacacccagtgccagtctctccacagccag
ttcctagggggcaccatgatcctggtggtgggtggcatcatcgtggcgacgctactcgtc
ttcatcattatcctgatgctgcgctacaaggccaccgacaatgagggtggtggcacgggg
gggatcggcaagctgaccagcgttagtgccacccactcacagaccaatgggggccggctg
ggacagaatggcatgcccctgcccttgcccaaacccaaggccaaagtgaccatccaagac
gaggtggtggagtttaaatgcggatccctccagagcagcctcacctcctcctcttcctcg
tcgggtggctcgatggccgggggtggctctcacagccccaacagcaccctggccaacatg
tggaggcaggcggccccctccaagccccgggccaacctggaccacctgctgggggccttc
aactccctagagctccgggcggcccaggccaggggtaggggagacctgggggagccatcc
tccagcagtagcactctagtggcgggcggcgataggccccccacagacagggagcccctg
ctgggccacacaatggactcacggctcagccgggtgctcatgctgcctctggactccaag
ccaaaaagaagccagtcgtttgacatgggggactgtatggatacaaaccggcaaacagag
aaagcgatggcctccagcgcctccacggccacaacgccggtgtgcagctacccccggcgc
atcagcagcatctggactaagaggagcttgtctgtaaatggcatgctgctgcagtgtgac
gaggagggggatatgggagggagcaaggggaccttcgagagccaagagtgggtcatggag
agtactgtctag
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