Salvelinus sp. IW2-2015 (Arctic char): 111954145
Help
Entry
111954145 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase zeta catalytic subunit
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
111954145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salp03400
]
111954145
Enzymes [BR:
salp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
111954145
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
111954145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
POL3_N
REV3_N
zf-C4pol
DNA_pol_B_exo1
FTCD_N
Motif
Other DBs
NCBI-GeneID:
111954145
NCBI-ProteinID:
XP_023829413
LinkDB
All DBs
Position
LG28:9322861..9483070
Genome browser
AA seq
3020 aa
AA seq
DB search
MFAVRIVTADYYLTSPLKDLDVIYNEFRESDVKKVPVVRIFGATPIGQKTCLHLHGIFPY
LYVPYDGYGQQTESYLRQVAFSIDRALNVSMGNPSSNTQHVFKVALVSGMPFYGYHAKEK
TFMKIYLYNPQMVKRVCELLQGGAVMNKRYQPHEAHIPYLLQLFIDYNLYGMNMVNLGAV
KFRRSQQREEGSPPDHQGFRSRPSTRPLKSPCTSKLSDSTLGGTFVCWQDDATPCSLVLE
DVEKQSTCELEADAVAADILNRLEIDNQIARNPGLQVIWEDEKQRRREKNQSSQIETPQS
QDRRFVASTESERIFMKRFKEILKENEFDVTQSGSVEGAPEEQDPFPAELSVYPDVLTPE
VLHCTPANQVEVHRDSQIDTKRNCGKDQGEAIVDEEAILSLLESSQTFLPLSQRSNHSPL
LDSSQNHAMVDLLAGLEDDGYRAAPMRQNSQHSLPGGGSAHYNSDEEEEGPELEREEAEL
SLMMSQRWDSDLPEQSSRQRPGVKDAEESFSDEPQESSDEEMERRGDNSLSANLSISQLD
GAADENSDSSLTDKGSRTHSSLTVTDKILGKRNPFPGETVHLEPLSSTKVLLECKHPEHR
QAHSQDAEEPANKHFLGQDSHECSTGFTVNKERPYIQLVKHPIPCNIANQAEVSQICVDK
MDVVRPLYTYEKKTMALEESDLDVFPFSHGKITQSRKKYSSMKNVEKNRLSILQNHRSFS
LCYSELRNCPSTTDLELGHKGCKSPILRNSITPTPCPIEEDELLAPLEGEMGHDSEDGNM
GELKIRYEDYQENKTERTIVAQQEAHYKFFPSVILSNCLTRPAKKVVGNKLTDGCAKLEQ
AETRRSRLKLGKRSLAAAAQKANAYAGETPASDTQVSTAFMAITPTCPKSTDTKEKPVTV
AKSVVVETGPTEPLPESPALAPTPLPAPIASPAPAPVPAILNEASVEGRLAPLLELPAKV
TCTKASGLPGSKYTLRAKRKMSYDSSEDGEQSVSSRIKHPLALRDRFKENYVLSTQELKY
QKRRKMYRKEPREPPIIIKYIIINRFKGQKNMLVKMAKVSAEEQRVVLTPDRVETYTKMS
PIKTFWPKVPESCAVKFPLSEPKASKKQSKRKAKVNTTTKKMVSSPPRVRVRQGGERPRR
TRGLRKTLTPSLPCPWPCYCELADDHITEYTDVMVELGYLSERSLSPVDSTPPRCWSPSD
PLMEAISSDRLVNPLNDPCLTFVCQDPPPESLGRGVRNRRRTTKPRNVTSTSPRRRITLS
EEVKKESTVRRKSTIGTPRRRKKDLETVDGTSVRCVCTTTITTRTRRPRRKKQAEEPEQP
PVRSRDCDSSQHLFPEGELPSTESSSEDIPPFQKPASKTSQIIDGSSSKSLNQFSQSIEP
KSEDCESSIMEVNQSFALELVQTQPDQPQGCAVKADTTADECTSHQVKSPTQVGDRKDAP
KECPHSGLRNGKTLPEDISGLAVLKKLQQKGGQCLSTTTQPPGSTPDTAAAKPSRARRAP
STTPRKPRAPRTTTAKEGKPRSRKEKANSQPEVPVKQKPPMSDDSPVFLSDPGLDSCYSI
EDSLSPELPHNYNFDINTIGIGSQAEFSSLYMGSQFVLTDKNLPQKFLSDITQEAVPALA
LSLEKRPEVLFGSGEELQESLSGPLTPELFDKPKNGDFVSNHRSPLDSERLPRSREWGTS
LGKLHSLSHFQGFHCERKELLFSAFDPILPLPLSSASFADNEGLPTGDLLEGNYAFTSTT
PSSSPRSFSSLSQVKAISQLLRGTGGGAHILKPLMSPPSREEILTTLLDLEMSEATFQEP
FCSNPSDAPGKPREVGGRKLMVETKLAKELAEFNGDLCLEGLQFWKTAFSTMTRAGSSHT
LGAEDTRDQAQLSPSSAGDQKVILLPCRSAPRRERVQLWLEARKQYEHLQRGRRDMGELE
RGRLEQVRDEQQTDRTEQPAPFHCSALEDEEEFEKLSGIRTRKERRDDLSLQISPVGGVE
TQNSPRGVKPVPDINIRDSEEEYSGKSISXDSPDLLPWQEPTQPSPSRPDAVEGERRGSD
RGLPLSPRLCTSPERREEKHFLSPSPFPSMKTRGDRECTSPQLHSTPVLRRHKGRGESET
VCSTPVTEDAESTSQRLQHRRGEHTDTLRRVLLTTQMKNQFDALNAPKKDNSQIEGPSIS
HSYGFKVSMQNLQDAKALHEVQHLTLMSMELHVRTRRDLEPDPEFDPICALFYCFSSDAP
LPDSDKTQLTGAIVVDEDCQESGQGVRGTAPLLVRSGVSGLQVTYAVNEKQLFQEVVTIM
RRFDPDILVGYEVQMRSWGYLLQRASALSVDLCQQLSRVPGDAKENHFAAERDEYGADTM
TEIHIIGRIVINLWRIMKTEVTLNNYSFENVAFHVLHQRFPLYSPRSLSDWFDHNTDLYR
WKVVDHYVSRVGGNXSFSSSMDIIGRTSELARVFGIQFYHVLTRGSQYRVESMMLRVAKP
MNYIPVTPSIQQRAQQRAPQGIPLVMEPESRFYSNSVVVLDFQSLFPSIVIAYNYCYSTC
LGHVESMGTADEFKFGCTSLRVPPELLYQLRNDITVSPNGIAFVKPTVRKGVLPSMLEEI
LNTRSMVKRSMKTYKQDKTLMRLLDARQLGLKLIANVTFGYAAANCSGRMPSVEVGDSIV
HKARETLERAIKLVNDTKKWGAHVVYGDTDSMFVLLKGATKEQAFKIGNEIAEAVTATNP
KPVKLKFEKVQSQLSMKCLDWLAVSVYLQCVLFNQQPSQPGFATTQCELGFIDIILERSI
KLLFETRDISQVKQFVQRQCVKVLEAKASMQDLTFAKEYRGSSSYRPGACVPALELTRRM
MAYDRRLEPRVGERVPYVIVYGTPGVPLIQLVRRPLEVLQDPGLRLNATYYITKQILPPL
RRIFQLIGVDVLSWYQELPRVQKASCSMVARGEEVGRKGTISQYFTTLHCPVCDELTQLG
VCASCRAEPQRVAVTLYQDMRLWESQQDQLLKICRNCSGSAERQVPCVSLDCPVLYKLSR
VNRQLTKAPYLRQLLEQFGF
NT seq
9063 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccgtccgtatcgttaccgctgactactaccttacaagtcctctcaaagacttg
gacgtcatttataacgaattcagagaaagtgacgtgaagaaagtaccagtggttcggatt
ttcggggcaactccaataggtcagaagacctgtctccacctccatggcatcttcccctac
ctctatgtgccctacgatggctacgggcagcagacggagagctacctgcgtcaggtggcc
ttcagcatcgacagggccctcaacgtgtccatgggaaacccctcctctaacacacagcac
gtcttcaaggtggcactggtctccggcatgcctttttatggataccatgccaaagagaag
acgtttatgaagatctatctgtacaatcctcagatggtcaaaagggtgtgtgagctgtta
caaggaggtgctgtgatgaacaagcgctaccaaccccacgaggctcacattccttacctg
ctgcagcttttcatcgactacaacctgtacggcatgaacatggtcaacctgggagccgtc
aagttccgccggagccagcagcgcgaagaggggtctcccccagatcaccagggcttccgc
agcagacccagcaccagacccttgaagagcccctgtacctccaaactgagtgacagtacc
ctgggaggcacgtttgtctgctggcaggacgatgccacaccctgttctctagtcctggag
gatgtggagaaacagagtacgtgtgagctggaggcagatgctgtggctgcagacatcctc
aaccgtctggagatagacaatcagattgccaggaaccctggcctgcaggtcatctgggag
gacgagaagcagagacgacgagagaagaaccagtcatctcagatcgagaccccacagtca
caggatcgcaggtttgtcgcctcgacggaaagcgagaggatcttcatgaagagattcaag
gagatcctgaaggaaaatgagtttgatgtgactcagtctgggtctgtggagggcgcgcca
gaggagcaggatcccttcccagctgaactgtctgtataccctgatgtcctgaccccagag
gtgctgcattgtacaccagctaaccaggtggaggttcacagagactctcagattgacact
aaaaggaactgtggtaaagaccagggggaggccattgtggatgaagaggccattctgagt
ctgttggaaagcagccagaccttcctccccctctcccaaagatccaaccactccccctta
ctagatagcagccagaaccatgccatggtggacctgctggcaggcctggaggatgatggg
tacagagcagcccctatgaggcagaactcccagcattctctgcccgggggagggagcgct
cactacaacagtgacgaggaggaggaggggccagagctagagagggaggaggcagaactc
agtctgatgatgtcacagagatgggacagcgaccttccagaacagtcttctagacagaga
cctggtgtgaaggatgcagaggagagcttcagtgacgagccccaggaatcctccgatgag
gagatggaaaggaggggggacaactctctctctgccaacctgtccatttctcagctggac
ggcgctgcggacgagaacagtgattcatcgttaacggacaaaggctccaggacccactcg
tccctcaccgtcacagacaagatcctggggaagaggaacccctttcctggggagactgtc
cacctggagcccctgtcctccaccaaggtcctcctggagtgcaaacaccctgaacatagg
caggcccactcacaggacgcagaggaaccagccaataagcacttcctcggccaggacagt
cacgagtgctccacggggttcacggtgaataaagagagaccttacatccagctggtcaaa
caccccatcccctgcaatatcgccaaccaggctgaggtttctcagatctgtgtggacaaa
atggacgttgttcggcctctgtacacctacgagaagaagacgatggctctggaggagtca
gacctggacgtctttccgttcagccacgggaagatcacccagagcaggaagaagtacagc
agtatgaagaacgttgagaagaatcgtctgtccatcctgcagaaccacaggagcttctcc
ctttgttactctgagctgaggaactgccccagcacgacagatctagaactgggtcataaa
ggctgtaaaagcccaatcctgagaaacagtataaccccaactccctgccccatagaagag
gacgagctcctggccccgctggagggcgagatgggccatgacagcgaggacggcaacatg
ggtgagctgaagatcaggtacgaggactatcaggagaacaagactgagaggaccatagta
gcccagcaggaggcgcactataagtttttccccagtgttattctctccaactgtctaacc
aggccagctaagaaggtagtgggcaacaagctgaccgatggctgtgctaagctagagcag
gcagagacacgcaggtccaggctaaagcttggcaagaggtctttggctgctgcagcccag
aaggctaatgcgtacgctggggaaaccccagcctctgacacccaagtcagcacagccttt
atggccatcacgcctacttgtccaaagagcacggacaccaaggagaagccagtcacagtg
gcaaagtcagtcgtagtggagactggacccacagaaccactgccagaatcccctgccctg
gcccctacccctctaccagcccctatcgcttcccctgcaccggccccagtccctgccatt
ctgaatgaggcgtctgtggagggcaggttggccccactgcttgagctccctgctaaagta
acctgcaccaaagcttcaggtctgcctggcagcaagtacaccctgagggccaaacgcaag
atgagctacgacagcagcgaggatggggaacagtcggtatcctctcgcattaaacaccct
ctggccctccgagaccgcttcaaagaaaactacgtcctcagcacgcaggaactaaagtac
cagaaacgacggaagatgtacagaaaggagccaagggagccgcccatcatcatcaaatat
ataatcatcaaccggttcaaaggtcaaaagaacatgttggtgaagatggccaaggtgagt
gctgaggagcagcgggtggtgctgacacctgacagagtggagacgtacaccaaaatgtca
cccatcaagaccttctggcctaaggttccagagtcttgtgcggtcaagttccctctcagt
gagcccaaggctagtaagaaacagtccaaacgaaaggccaaggtcaacaccaccactaag
aaaatggtcagcagtccacccagagtccgagttaggcaagggggtgagaggcctagaagg
actagaggccttagaaaaaccttgactccctctctgccatgcccctggccatgttactgt
gaactggccgatgaccacatcactgagtacactgatgtgatggtggagttgggttatcta
tctgagagatcccttagccctgttgattcaaccccaccccggtgttggtcccccagtgac
ccccttatggaagccataagttctgatcggttggtgaacccattaaatgatccctgtctc
acttttgtttgtcaggacccccccccagagtccttaggccgaggcgtgcggaaccgcaga
cggactactaaacctagaaatgtaacctctaccagcccaagaagacggattacgctttca
gaggaagtcaaaaaggagagcacagtgagaaggaaaagtactattgggactccaaggagg
agaaagaaagatctagaaacagttgatggaactagtgtgcgttgtgtctgtactactacc
atcaccacaagaacgaggaggcctcgaaggaagaagcaggcagaagagcctgaacagccc
cctgtaagaagcagagactgtgacagttcccagcacctcttcccagagggtgagctgcct
tctactgaatcctcctcagaggacataccaccctttcagaagccagccagcaaaaccagc
caaatcattgacggctccagctctaaatccctaaaccagttctcgcagtctattgaacca
aagtctgaggactgtgaaagctccatcatggaggtgaaccaaagctttgctcttgaactc
gtccaaacgcagcccgaccaaccgcagggttgtgctgtgaaggcagacactactgctgat
gaatgcacatcccatcaggttaaatccccaacccaggtgggggacagaaaggacgccccc
aaagagtgcccccactcaggccttcggaatgggaagaccttacctgaggacatctctggc
ctggctgttctgaagaagctccagcagaaaggcgggcagtgcctttccactacaacacag
ccccctggctccacaccagacactgctgcagccaagccatcaagagccaggagagctccc
tcaaccaccccacggaaaccccgggccccaagaactacaactgccaaggaggggaaaccc
agaagcaggaaggagaaggcaaactctcagccggaggtacctgtgaagcaaaagcccccc
atgtcagatgacagcccagtgttcctgtcagacccaggcctggacagctgttactccata
gaggacagcctatccccagagctcccacacaactacaactttgacatcaacaccatcggt
atcggtagccaggcagagttctccagcctgtacatgggcagtcagtttgttctgaccgac
aagaacctgcctcagaagttcctgagtgacatcacccaggaggcggtacctgccttggcg
ctgagcttagagaagaggcctgaggtgctgtttggctcaggggaggagctccaagaaagc
ttgtccggacctctgactcctgaactctttgacaagccaaaaaatggcgattttgtgtcc
aatcatcgatcacctctggactctgagaggttaccaaggagcagagagtggggaacgtct
ttgggcaaactccacagcctcagccacttccagggctttcactgtgagaggaaagagctg
ctgttctctgcctttgaccccatcttaccactgcctttgagctctgcgtctttcgcagac
aacgaagggttgccgactggggacctactggaggggaattatgcttttacatcgaccaca
cccagtagttcgccgcgctccttcagctctctatcccaggtgaaggccatcagccagctc
ctcagagggacaggggggggagcccacatcctcaagcccctcatgtcccctcccagccgg
gaagagatcctcaccaccctcctggacctggagatgtctgaggccaccttccaggagccc
ttctgcagcaacccctcagacgccccagggaaacctagggaggttggtgggcgtaagctg
atggtggagaccaagttggccaaggagctggctgagttcaacggggacctgtgcctggag
gggctacagttctggaagacagccttctctaccatgacccgggccggctcctctcacaca
ctgggagcagaggacaccagagaccaggcccagctcagcccctcttcagccggggaccag
aaggtcatcctgctgccttgcaggagtgcccccaggcgggaacgcgtccagctatggctg
gaggccagaaaacagtatgagcatctgcagaggggcaggagagacatgggagaactggag
aggggaaggttggaacaggtaagagacgagcagcaaacagacaggactgaacagcccgct
ccgttccattgttcagcattggaggacgaggaggagtttgagaagctctcaggtatcagg
actcggaaggaaaggagggacgatctgtccctacagatatcacctgttggaggggtggaa
actcagaacagtcccagaggagtgaagcctgtaccggacattaacatcagagactctgag
gaggagtactctggtaaatccatctctscagactcaccagacctgctgccatggcaggag
cccacgcagcccagtccctcacgaccagacgcagtagaaggagagaggagagggtcagat
cgagggttacccctgtcccccaggctctgcacctccccagagaggagagaggagaagcac
ttcctcagtccctctcccttcccttccatgaagacccggggggacagggagtgtaccagc
ccccagctccacagcaccccagtccttaggcgacacaaaggcaggggtgagtcggagact
gtgtgcagtacccctgtractgaagacgcagagtccacatctcagagactgcagcacagg
agaggggaacacacagacaccctgaggagagtgctactgaccacacagatgaagaaccag
tttgatgctttgaacgctccaaagaaagacaactctcagatcgagggccccagcatcagc
cattcatacggattcaaagtcagcatgcagaacctccaggacgctaaagccctgcacgag
gtgcagcacctgacgttgatgagcatggagcttcacgtgcggacccggcgggacctggaa
cccgacccagagtttgaccccatatgtgccttattctactgcttcagctctgacgcacct
ttacctgactcagacaagacccagctgactggggccatcgtggtagacgaggactgccag
gagagtggccaaggtgtcagaggaacagcgcccctgctggtaagatcaggtgtctcagga
ctgcaggtcacctacgctgtgaatgagaagcagctgttccaggaagttgtcactatcatg
aggaggtttgacccagacatcctggtgggctacgaggtccagatgcgttcctggggctac
ctcctccagcgggcatcagcactcagtgtggacctgtgccagcagctttcccgggtgcca
ggtgacgccaaagagaaccatttcgcagcagagagagacgagtatggagcagacaccatg
acagagatacacatcatcggacgtatcgtcatcaacctgtggagaattatgaagactgag
gtgacattgaacaactacagttttgagaatgtggccttccacgtcctgcaccagcgcttc
cccctgtacagcccccgctccctgtcagactggttcgaccacaacactgacctrtacagg
tggaaggtggtggaccactatgttagccgggtgggcggtaatngcagcttctccagcagc
atggacatcatcggcaggaccagcgagctggccagggtgtttgggatccagttctatcac
gtgctcaccaggggatcccagtaccgtgtggagtccatgatgctgcgtgtggccaagccc
atgaactacatycccgttacgcccagcatacaacagagagcccagcagagggcgccacag
ggcatcccgctggtcatggagcctgagtcgcgcttctacagcaactctgtggtggtgctg
gacttccagtcgctcttcccctccatcgtcatcgcctacaactactgctactctacctgc
ctgggccacgtggagagcatgggaacggccgatgagtttaagtttggctgcacctccctg
agggttccccctgagctcctctatcaactccgcaatgacatcaccgtctctcccaacggc
atcgcctttgtcaagcccacggtgaggaagggggtcctgcccagcatgttggaggagata
ctgaacacgcggtccatggtgaagcgttccatgaagacctacaagcaggataagaccttg
atgaggctgctggacgccaggcagctgggactcaagctcatcgccaacgtcaccttcggc
tatgccgccgccaactgctctggacgcatgcccagcgtagaggttggtgacagtattgtc
cacaaggccagggagactctggagagagccatcaagctggtcaacgacaccaagaaatgg
ggagcccacgttgtgtacggtgacacagacagcatgtttgtcctgctaaagggagcaact
aaagagcaggctttcaagatcggcaacgagatcgcagaggcagtgactgctaccaaccct
aaacctgtcaagctgaagtttgagaaggtacagtctcagctcagtatgaagtgtctagac
tggctggctgtgtcagtctatttacagtgtgtcttattcaatcaacagccctcacaaccc
ggatttgctactactcagtgtgaattaggtttcattgacattattttggagcgttccatc
aagctgctgtttgagacgcgggacatcagccaggtgaagcagtttgtgcagcgtcagtgt
gtgaaggtgctggaggccaaggccagcatgcaggacctgaccttcgctaaggagtacagg
ggcagcagctcctaccggccgggggcctgcgtccctgctctggagctcaccaggcgtatg
atggcttatgaccggcgcctggagccacgggtgggcgagcgggtgccctacgtgatcgtg
tacgggacgcccggcgtgcccctcatccagctggtgcggcggcccctggaggtgctgcag
gacccgggcctgcgcctcaacgccacctactacatcaccaagcagatcctgcccccgctg
cggcgcatcttccagctcatcggcgtggacgtgctcagctggtaccaggagctccccagg
gtccagaaggcgtcatgctccatggtggccagaggggaggaagtggggaggaaggggact
atctcccagtacttcaccacgctgcactgtcctgtgtgtgacgagctcacccagctaggg
gtgtgtgccagctgccgggccgagccccaacgcgtggccgtcacactctaccaggacatg
cggctttgggagagccagcaggaccagctgctaaagatctgtcggaactgcagcggcagt
gcggagcgccaggttccgtgtgtgtctctggactgtcctgtgctctacaagctgtcccgg
gtcaacagacagctcaccaaggccccctacctccgacagctcctggagcagttcggattc
tga
DBGET
integrated database retrieval system
