Salvelinus sp. IW2-2015 (Arctic char): 111954235
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Entry
111954235 CDS
T05762
Name
(RefSeq) nesprin-2-like isoform X1
KO
K19326
nesprin-1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111954235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111954235
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
111954235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
KASH
Spectrin_SYNE1
SYNE1
Motif
Other DBs
NCBI-GeneID:
111954235
NCBI-ProteinID:
XP_023829557
LinkDB
All DBs
AA seq
1761 aa
AA seq
DB search
MGALNLSWLLLEGKLGSQVCQAEELFRICAEREKRLRRVLSWAVGQRERLREWQRPVSQT
QVDKALQEWEAVEEKLKDVCVEVEDLVRDTWSADTVTQVCTDFNQQVGSLRPVLQRLLVQ
WGQFEKELGDVSFYTTKLRCGLEHSSGPFLSSHQVKRHVKHLQCLQEEAGMGAEMWTALD
QSYAGLSDAISPGAAQLLIERLEEERTQWKALVQEVDEELLRTGDLLSFWGEYNRLYDQC
SVRLQHHQEQWGALLSFLSTPCHSTQDLVDAIKHQQVGFEDVQGSLGKVLEASKPLIGQA
EPIVAAIVQSKSMLLSRDLVLLGQALSGKRARLQEDLDQRHTISSSMDSLELQTEALRHM
LTSDVCSMDSVKTALMALSHLRPALDDLTEARLSVTLDGLEADRLKSLTRKWAQALYCAS
HMNRTLQAEAQHSQSLQQKWDSWECFQEKMEEDLAPDVSGNYSGLHEQLAIHQRLRIEVL
AGHQLLRGVIVISMRSIEDTPEEKSRPDLTLKLAQMRERWQRIVSVAQQRSSLVQERLGQ
WRFYTRGVRRLGGLLRDVETLLPSAAQALCTLQQLPCSLGRAEETLAQHNGFYRHTLETG
RLLSSMAELQTQAQLQTELQTLQESWDHATELLRERRILLETNVQNWGHFQVKLVDSAHK
LDELRDRLKQPLPEKLEELQGEEKLTEENEASLELWAGGVKELSSMKTDLSQYILAGDAT
LLQGQVEQLHCQWEELCLKVSLRRQEIADRLSAWTIFNDKNKELCDWLTQMENKVSHSGD
LSLEEMVEKLKKDCMEEINLFSENKSHLKQLGEQLMLASDQAKQAQLHGTLRDARDRWQH
LFHHIEARLRKLKETLGMVQQLDKNMSNLRSWLSRIETQLARPVTYNVCHHEEIQRRLAQ
QQELQRDIEQHTEGVASVLRLCDILLHDQDACGGGDGENDSIQQTTCSLDQRWRAICAMS
LERRLRIEETWRLWCKFLDDYSCFEDWLKVAERTAANPNSDNVPYTVAKEELKKFEGFQR
QVQERVTQLELVNNQYRRLARENRTDGASRIKVMVHEGNCRWDALHRRTAAILRRLKHFT
GQREEFEGTRESLLVWLTEMDLQLTNVEHFSETDTQHKMKQLNSFQREITLNTERIDGLI
VFGEGLIQRSSPLDAALIEDELEELHSYCQEVFGRVVRFHQRLTQPPVLKEEPELFSGDK
PLEGSCELIGHSWLGRSQSQGSAPATPTHLLAPPLECSGRETPVSMCDSIPLEWDHTGDV
GGSSSHEEEEEEVEKKDGTYYSTLSEVEVTESPEDFVKATALSLGADPSVPLRAMAIPES
PSWRSPGDPDRKYLHLDSPDGLDPSPTHTSTPFKQGYVRLMSECSGSIKSVKRVSLILDD
EEQPEEQGLTGLTTADKQSGVIERWELLQAQARSNLLSGLREPCQLTSDLRDITSWLGWV
TPELERVQVRETPTSIQDMEARVKQLKEMQKVFAHYKAVMLSLNLGGRELGGCDGPEARE
LGEGLASMNQGWMLACTGLEEWQDSLRTTVMRCQEFHETLHSLLLWLAHAESRRYAVDIH
HPDTPPGTLLEHRNTLTGLQNELRARQSQVGSLQGLWSQLQPAEEGGGEESVEAREKLHV
TANKLWTLLRQVAHDLSVVQERLDCGTLSAGPAAARAAVESEGRGQAEGSQSPSNASQEE
GTNTTPTSAGRRGEKRDPTPPRSFFYRVLRAAFPLHLLLLLVLVLACLVPLAENDHSCTL
SNNFARSFYPMLRYTNGPPPT
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccctcaacttaagctggctcctcctagaagggaagctgggcagtcaagtgtgc
caggctgaggagctgttccgcatctgcgcagaaagagagaagcgactgcgacgggtgctc
agctgggctgtggggcagagagagaggctgagggagtggcagagacctgtcagtcagaca
caggtggacaaggccctgcaggagtgggaggctgtggaggagaaactgaaagacgtgtgt
gtggaggtcgaggatctggtccgcgacacctggtctgcagacacagtcacccaggtctgc
acagacttcaaccaacaggttgggagcctgaggcctgttctccagcggttgctagttcag
tggggccaatttgagaaggagctgggtgatgtttcattctacaccactaagctgcgctgt
ggtctggaacacagcagtggtcccttcctctcctcccaccaggtcaaaaggcatgtgaag
catctacagtgcctccaggaggaggctgggatgggggcggagatgtggactgctctggac
cagtcgtacgcaggcctgtcggacgctatcagtcctggagcggcccaactccttattgag
agacttgaggaggagagaacacagtggaaggcgctagtgcaggaagtggatgaggagctg
ctgagaactggggatctgctgtcgttctggggggagtacaaccgtctgtacgaccaatgc
tccgtccgcctgcaacaccaccaggaacagtggggggcgctgctcagcttcctgtcgaca
ccatgccactccacacaggacctggtcgatgccatcaagcatcagcaggttggctttgag
gatgttcaaggcagtctgggcaaagtcctggaagcctccaagcctctgattggacaggcg
gagccaattgtcgccgccatcgtccaatcaaagtccatgttgttgtcacgtgacctcgtg
ctactgggccaggcgttgtcagggaagcgtgcacggcttcaggaggatttggatcaacgc
cacacaattagcagtagtatggattcactggagctgcagaccgaggctttgcgtcacatg
ctcacttctgatgtctgcagcatggacagtgtgaagactgctctgatggcactgagccat
ctgcgtcctgccctggatgacctcactgaggcacgcctttctgtgaccctggatggcctg
gaagcagatagactgaagtccctgaccaggaagtgggcgcaggccctctactgcgcctcc
catatgaacagaacattgcaagctgaggcccagcactcccagagccttcaacagaagtgg
gacagctgggagtgcttccaggagaagatggaggaggacttggccccagacgtttctgga
aactactctggcctccatgagcaactggcaatccatcagagactccggattgaagtattg
gctgggcaccaactcttgagaggggttatcgtcatctcaatgaggtcaattgaagacaca
ccagaggagaaaagcaggcctgacctcaccctaaagcttgcccagatgagagagcgatgg
cagcggattgttagtgtggcacagcagcgaagtagcctggtgcaggaacggctgggccag
tggcggttctacacccggggtgtgaggaggctaggggggctgctgagagatgtggagacc
ttacttccttctgctgctcaggccctctgcactctgcagcagctaccatgttccctgggg
cgtgctgaagagactctcgcccaacacaacggcttctacagacacacactagagacaggc
aggctgctgtcctccatggcagagctacagacacaggcccagctacagacagagttacag
accttgcaggagtcctgggaccacgccacggagctactgagagaaaggagaatcctactg
gaaactaatgttcagaattggggccactttcaggtcaaactagtcgacagcgcacacaaa
ctggatgagctcagggacaggctgaagcaaccgctgccagagaagctggaggagctacag
ggtgaagagaagctcacagaggaaaacgaggcctctctggagttgtgggctggtggagtg
aaggagttgtcctccatgaagacggatctgtcccagtacatcttggccggggatgctacc
ctactacaaggacaggtggagcagctgcactgccagtgggaggaactctgtctaaaggta
tccctacgcaggcaggagatcgccgaccggctcagtgcctggaccatcttcaatgacaag
aacaaggagctgtgcgactggctgacccagatggagaacaaggtgtcgcacagcggagac
ctcagcctcgaggagatggtggagaaactgaagaaggactgtatggaggagatcaacctg
ttcagtgagaacaaaagccacctcaagcagctgggggagcagctgatgctggccagtgac
caggccaagcaggcccagctccacggcaccttgagggacgccagggaccgttggcagcac
ctcttccaccacatagaggccaggctgaggaagctgaaggagaccctgggtatggtgcag
cagctggacaagaacatgagcaacctgcgatcatggctgtcccgcatcgagacccagctg
gccaggcccgtcacctacaacgtgtgtcaccatgaggagatccagagacggctcgcccaa
cagcaggagctacagagggacatcgagcagcacacggagggcgtggcgtccgtcttgagg
ctgtgcgacatcctgctgcacgaccaggatgcgtgtggtggaggcgacggcgagaatgac
tccatccagcagaccacctgcagcctagaccagcgctggagggccatctgtgccatgtcc
ctggagaggaggctcaggatcgaggagacctggaggctgtggtgtaagttcctggatgac
tactcgtgctttgaggactggctcaaggtggccgaacgcacggcagccaaccccaactct
gacaacgttccgtacacagtcgccaaggaggagctcaagaagtttgagggcttccagagg
caggtgcaggagcgtgtgacccagctggagctggtcaacaaccagtaccgcaggctggcc
cgggagaaccgcacagacggcgccagccgcatcaaggttatggtccatgagggcaactgc
cgctgggatgcactgcacaggaggacagcggccatcttacgcaggctaaagcattttacg
ggtcagagagaggagtttgaggggaccagggagagcctgctggtgtggctgacggagatg
gacctgcagctcaccaacgtggagcacttttcagagacagacacgcagcacaagatgaag
cagctcaactccttccagagggagatcaccctcaacacggagcgcatcgacgggctgatt
gtgttcggtgagggcctgatccagaggagctctccgctggacgccgctctcatcgaggac
gagctagaggagctacactcctactgtcaggaggtgtttggcagggtggtccgcttccac
cagcgcctcacgcagccaccggtgttgaaggaggaaccggagctcttcagtggggacaag
cccctggaggggagctgcgagctgattggccattcctggctggggcggagccagagtcag
gggagtgcccctgccacacccacccacctgttggcccctcccctggagtgttcgggccgg
gagacacccgtgagcatgtgcgactccatccctctggaatgggaccacacgggagacgta
ggaggatcttcgtcccatgaggaggaggaggaggaggttgagaagaaagacgggacctac
tacagtactctgtcagaggtggaggttacagagagtccagaggactttgtgaaagccacg
gctctctcactgggagctgatccctctgttccactcagagccatggccatacccgaatct
ccaagttggcgctcaccaggcgacccggacaggaagtacctccacctggactctcctgac
ggcctagacccctcacctacacacactagcactcccttcaaacaaggctacgtgcgtctg
atgtcagagtgcagtggtagcatcaaaagtgtcaaaagggtctccctgatcctggatgat
gaggagcagcccgaggaacagggcctcactggcctgacgaccgctgacaaacaatcaggg
gtgatcgagcgttgggagctgctgcaggctcaggccaggagcaacctgctgtctggcctg
cgggagccttgccagttgacctctgacctgcgtgacatcacttcctggctggggtgggta
acgccggagctggagagagtgcaggttcgcgagacccccaccagcatccaagacatggag
gctagggtcaaacaactcaaggagatgcagaaggtatttgctcactacaaggccgtcatg
ctgtcgcttaacctgggcggtcgtgagttgggggggtgtgacggtccggaggctcgggag
ctaggggagggcctggctagtatgaaccagggctggatgctggcctgcactggcctggag
gagtggcaggacagtctgcgtaccactgtcatgcgctgtcaggagttccacgagacgctg
cactccctgcttctgtggctggcccatgccgagagcaggcgctacgccgtcgacatccac
cacccggacacgccgccaggcacgctgttggagcaccgcaacacactcactggcctgcag
aatgagttgcgggcgagacagagccaggtgggctcgctccaggggctgtggagccagctg
cagccagcggaggagggggggggggaggagagcgtagaagctcgggagaagctccacgtg
acagccaacaaactgtggacgctgctccgccaggtggcccacgacctcagcgtcgtgcag
gagcgcctggactgtgggactctatctgcaggtccggctgcggctcgagctgcagttgaa
agtgagggcagagggcaggcggagggaagccagtccccgtctaatgccagtcaagaggag
ggcaccaataccacaccaacctcagctggcagaaggggggagaagagggacccaacccca
cctcgctccttcttctaccgcgtgctgcgagccgccttccccctacacctcctcctcctc
ctggtcctagtgctggcctgcctggtgcccctggctgagaatgaccacagctgcacactg
tccaacaactttgcccgctccttctaccccatgttgcgctacaccaatggcccaccaccc
acctga
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integrated database retrieval system