Salvelinus sp. IW2-2015 (Arctic char): 111954356
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Entry
111954356 CDS
T05762
Name
(RefSeq) tumor necrosis factor receptor superfamily member 21
KO
K05157
tumor necrosis factor receptor superfamily member 21
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
111954356
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
salp04050
]
111954356
04090 CD molecules [BR:
salp04090
]
111954356
Cytokine receptors [BR:
salp04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
111954356
CD molecules [BR:
salp04090
]
Proteins
111954356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
ETRAMP
CARD
DUF1451
Motif
Other DBs
NCBI-GeneID:
111954356
NCBI-ProteinID:
XP_023829798
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Position
LG28:16711237..16741576
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AA seq
658 aa
AA seq
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MRSSQTFAQNWKMSVLCVSVALLYSVVGEASSQPLTPSPGTEIVALSARHYYHTDQSTGS
QLVCDKCPAGTFVSRHCNQTNVRECSRCGEGTFTRGENGVQQCHRCRRPCSAPLVEKFPC
TATLDRVCTCPPDTFAKGDTCTPHFLCPVGSGVKKRGSEVEDVSCKVCARGSFSDVVSSV
LRCRTHTDCLAQGLPLLAAGTRETDNICGSASPTSPTLLGPAQSAFIQEPSSSSAGPVHK
DAFSLTAGSEVLELLLSTTGTLPSSSNSQDSTPSGSYEASPEDDVEVLNLAATAGAQDPT
QTEHRRTHPAANKRAMDGVEDGSEVGVGQGVQRSGYRPTRRGSPRPSTHTHFDINEHLPW
MIVLLLLLVLVVIVVCSVKRSSRVLKKGPVQDPSSIIEKAIQKKTCPPTQTKEKWIYYSN
GQGVDILKLVAAQIGSQWIDMYQSLANATEREVAAFSNGYQSDHDRAYAALQHWTIRDGD
ANLAKLINALHRHHRIDVVEKIRGVMEDNPQFDLNQLMTAVNVTPSHSPVHKPLDSPRVL
VEQSPVHRTKGFFPDESEPLLRCDSTSSKDSALSRTGSFITKEKKDTVLRQVRLDRCDLQ
PIFDDMLHILNPDELHVIEEIPMAEDKLDRLFEIAGVKSQEASQTLLDSVYSHLPDLL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgagaagtagccaaacatttgctcagaactggaaaatgtcagtgctctgtgtgtctgtg
gcgctactgtacagtgtggttggtgaggcctctagccagcctctgacacccagccctggc
actgagatagtggccctgtctgcccgccactactaccacacagaccaaagcacgggcagt
caactggtttgtgacaagtgccccgcaggaaccttcgtgtccaggcactgcaaccagacc
aacgtgagggagtgcagccgctgtggcgagggcacattcacgcgcggagagaacggggtt
cagcaatgccaccgctgcaggaggccctgcagcgcccccctcgttgagaagttcccctgc
acggccaccttggaccgggtctgcacctgccccccggacaccttcgccaagggggacacc
tgtactccccacttcctgtgccctgtgggctcaggggtgaagaaaaggggcagcgaggtg
gaggatgtgagctgtaaggtgtgcgcgcgagggagcttctcggacgtggtttccagtgta
ttgaggtgcaggacacacacagactgtctggcccagggtctgcccctactggcagcaggc
accagagagacagacaacatctgtggatctgcttctcccacctcccccaccctcctggga
cctgcacagtctgccttcatccaggagccctcctcttcctcagctggcccagtacacaaa
gatgccttcagcctgacagcaggttctgaggtcttagagctcttactgagtaccacgggg
actctacccagctccagcaacagccaggactccaccccatcaggctcctatgaggccagc
cccgaagatgatgtagaggtgctgaacctggccgctacggccggagcccaggaccccaca
cagactgagcaccgccgcacccacccggcagccaacaagcgggccatggacggcgtagag
gacggatcggaggtaggggtaggtcagggtgtgcaaagatcagggtacaggcccacacga
aggggctcccccaggcccagcactcatacacactttgacatcaacgagcacttgccctgg
atgatcgtgctgctgctgctgctggtgctggtggtgatcgtggtgtgcagcgtgaagagg
agctccagagtgctgaagaagggaccagttcaggaccccagcagcatcattgagaaagca
atccagaagaagacctgccccccgacacagaccaaggagaagtggatctactactccaat
ggacagggtgtggacatcctgaagttggtggcagctcagattggcagccagtggatcgac
atgtaccagtccctggccaatgccacagagcgcgaggtggcagccttctccaatggctac
cagtcggaccacgaccgggcatacgctgccctgcaacactggaccatccgcgacggggac
gctaacctggccaagctcatcaacgccctgcaccgccaccaccgcatcgacgtggtggag
aagatacggggcgtcatggaagacaatcctcagtttgatctgaaccagctgatgaccgct
gtgaatgtaaccccgagccacagtcctgtccacaagcctttggattctcctagggtgctg
gtggagcagtctcctgtgcaccggaccaagggtttcttccctgatgaatcagagcccctt
ctccgctgtgactccacctccagcaaagactccgccctcagcaggaccggctcgttcatt
accaaagagaagaaagacacggtgctacgtcaggtccggctggaccggtgcgacctgcaa
cccatcttcgacgacatgctgcacatcctaaaccctgacgagctgcacgtcatcgaggag
atccccatggccgaggacaaactggaccgcctctttgagattgccggggtcaagagccag
gaggccagccagaccctgctagactcggtctacagccacttgcctgacctcctatag
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