Salvelinus sp. IW2-2015 (Arctic char): 111954396
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Entry
111954396 CDS
T05762
Name
(RefSeq) receptor-type tyrosine-protein phosphatase kappa isoform X1
KO
K06776
receptor-type tyrosine-protein phosphatase kappa [EC:
3.1.3.48
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
salp01009
]
111954396
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
salp04515
]
111954396
Enzymes [BR:
salp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
111954396
Protein phosphatases and associated proteins [BR:
salp01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
111954396
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
Type II RPTP family
111954396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
I-set
Tc-R-P
ig
Ig_3
Y_phosphatase3
Ig_2
PTPlike_phytase
Motif
Other DBs
NCBI-GeneID:
111954396
NCBI-ProteinID:
XP_023829880
LinkDB
All DBs
Position
LG28:complement(10366007..10531403)
Genome browser
AA seq
1488 aa
AA seq
DB search
MDTCRLGFILLYFSILSVGAQFTTGGCTFDDGPAQCDYQQDPYDDFDWTHVSAQEVPYLS
SELPQGSYMMVDSSQHDAGEKARIQLPVMKENDTHCIDFNYLLYTQDGSSPGTLNILVKV
NKGPLANPIWNVTSYTGKDWLRAELAVSTFWPNEYQVIFEAEVSDGKTGFIAIDDIQVLS
YPCDKSPHFLRLGDVEVNAGQNATFQCIATGRDTVNNRLWLQRRNGEDIPVASTKNINHR
RFAASFRLKEVTSLDQDLYRCVTQSERGSGVSNFAGLIVREPPRPIAPPQLLGVGPTYLL
IQLNANSIFGDGPIILKEVEYRMTSGIWIETHAVNSPNYKLWHLDPDTEYEIRVLLTRPG
EGGTGQPGPPLITRTKCAEPMRTPKRLKIAETQARFIAVDWESLGYNITRCHTFNVTICY
RYYNANNQTKADCLDMDPKAPRHVVGNLPPNTNVSLKMILTNPEGRKESDETIIQTDEDV
PGPVPSQSMKATPFEDRIFLYWKEPLEPNGIITQYEIAYSGIRSFDPSVPIMRPPLIVSL
PWNTSHHVFNQLHPGTTYQFIIRASTVKGFGPPTTLNVTTNISAPTLEEYDGSEAFLNET
ATTITVLLKPAQAKGAPISAYQIVVEELNPHRTRREASSVDCYQVPVPFHSASSGGSPYY
FAAELPPGNLPEPSPFTVGDNKTYHGFWNPPLAPRKNYNIYFQAVSSVEKESKTQCLRLA
TKGATEEPEVIPDPAKQTDRVVKIAGISAGVLVFILLVLVAILLVKKRRSYYSYSYYLKL
AKKRKDAIGNTRQEMTHMVNAMDRSYADQSTLHTEDPMAVTFMDSHNFSNRLPNDPLVPT
AVLVPITDENHTAAAAESSRLLDVPRYHCEGTESPYQTGQLHPAIRVADLLQHINLMKTS
DSYGFKEEYESFFEGQSASWDVAKKDTNRTKNRYGNIIAYDHSRVILQPMEDDPSSDYIN
ANYIDVSGAASSIGERVRHNRPSLIWLYRDGYQRPSHYIATQGPVHETVYDFWRMVWQEQ
SACIVMVTNLVEVGRVKCYKYWPDDAEVYGDFKVTFVEVEPLAEYVVRTFTLERRGFNEL
REVKQFHFTGWPDHGVPYHATGLLSFIRRVKISNPPSAGPIVVHCSAGAGRTGCYIVIDI
MLDMAEREGVVDIYNCVKALRSRRINMVQTEEQYIFIHDAILEACLCGETAIPACEYKAA
YYDMIRIDSQSNSSHLKDEFQTLNSVTPQPQPEDCSIALLPRNHEKNRFMDMLPPDRCLP
FLITIDGESSNYINAALMDSYRQPAAFIVTQHPLPNTVKDFWRLVYDYGCTSLVMLNEID
LAQVVVVNQGCPQYWPEEGMLRYGPVQVECMSCSMDCDVISRLFRICNLTRPQEGYLMVR
QFQYLGWAAHREVPASKRSFLKLILQVDKWQEECEEGEGRTIIHCLNGGGRSGMFCAISI
VCEMIKRQNVVDVFHAVKSLRNSKPNMVDSPDQYRFCYDLALEFIETS
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggatacgtgtagacttggcttcatactactctacttttcaattctaagcgttggggct
caattcacgacaggtggctgtacatttgacgatggcccagcccagtgtgactaccagcag
gatccctatgacgactttgactggacccatgtcagcgcacaggaagtgccatacttgtca
tctgaactgccccaaggttcctacatgatggtggactcctcccagcacgatgccggagag
aaggcccgcatccagctgccagtaatgaaggaaaacgacacccactgtattgacttcaac
tacttattgtacacccaagatggctccagcccggggacgctgaacatcctggtgaaggtt
aacaaaggtcccctggctaatcccatctggaatgtgaccagctacaccgggaaggactgg
ctccgggctgagctggccgtcagtaccttctggcctaacgagtatcaggtcatatttgag
gcggaggtctcggacgggaagaccggcttcattgcgattgatgacatccaggttttgagc
tatccgtgtgataaatcgcctcacttcctgcgcctgggagatgtggaagtcaacgccggg
cagaacgccaccttccagtgcatcgccaccggccgggataccgtgaacaacaggctgtgg
ctgcagaggagaaatggggaagacattcccgtggcgtcgactaagaacatcaaccacagg
cggttcgctgcctcgttcagactcaaggaagtgactagtctggaccaagacctttaccga
tgtgtcacccagtcagagagaggatctggtgtgtccaacttcgccggactcatcgtcaga
gaacccccgcggcctatcgcaccccctcagctgctgggcgtggggcccacctacctcctg
atccagctcaatgccaactccatattcggggacggccccatcattctgaaggaggtggag
tatcgcatgacatcagggatctggatagagacccatgctgtcaactcccctaactacaag
ctgtggcacctggacccagacacagagtacgagatccgtgtgctgctcaccagaccaggg
gaggggggcaccggccagcctggaccaccactcatcaccaggacaaagtgtgccgagccg
atgcggaccccgaagagactgaagattgcggagacccaggccagattcatcgctgtggac
tgggagtctttgggctacaatatcacccgctgccacaccttcaacgtcaccatctgctac
cgttactacaacgccaacaaccagaccaaggccgactgcctggacatggaccccaaggcc
ccacgccatgtggtgggcaacctgccccccaacaccaatgtcagcctcaagatgatcctg
accaaccccgaaggacgcaaggagagcgacgagaccatcatccagacagatgaagatgtg
cctggccccgttccaagccagtccatgaaagccacaccgtttgaggatcggatcttcctt
tactggaaggaaccactggagcccaatgggatcataactcagtatgagatcgcctacagt
ggtattcggtcctttgacccctcggtgccgataatgcgcccccctctgatcgtgtctctg
ccctggaacacttctcaccacgtcttcaaccagctgcaccctggcaccacctaccagttc
atcatacgagccagcaccgtcaagggcttcggccccccgaccacactcaacgtcaccacc
aacatctcagccccaacactggaagagtatgatgggtccgaggcgtttctgaatgaaacg
gccaccaccatcaccgtcctactgaagcccgctcaggccaaaggtgcccctatcagcgct
tatcagatcgtggtggaggagctgaacccacatcgcacacgcagggaggccagctccgtg
gactgctaccaggtcccagtccccttccacagtgcctccagtggtggctcgccttattac
tttgcggcagaactgccaccagggaaccttcccgaaccctctccgttcacggtgggcgac
aacaagacgtaccatggcttctggaaccctccgctcgcccccaggaagaactataatatc
tacttccaggccgtcagcagtgtggagaaggaatcaaaaacacaatgtctgagacttgca
acaaaaggagctacagaggaaccagaggtgatcccggacccagccaagcagacagacagg
gtggtgaagattgctggcatcagtgctggggtgctggttttcatcctactggtgctggtg
gccatccttctggtcaagaagaggaggagctactattcttactcatattacctgaaactg
gccaagaagcgcaaagatgccattgggaatactcgtcaggaaatgactcacatggtgaat
gccatggaccgcagttatgctgatcagagcacgctccacactgaggatcccatggccgtc
acattcatggactcccacaacttcagcaacagattgcctaatgatccactagtgccaacg
gcagtgctagtgccaattaccgatgagaaccacactgcagctgctgcagagtccagtcgg
ctgctggacgtccctcggtaccactgtgaggggacagagtcgccctaccagaccggtcag
ctgcacccagccatcagggtggctgacctgctccaacacataaacctgatgaagacctcc
gacagctacggcttcaaggaggaatatgagagtttttttgaaggccagtccgcttcctgg
gacgtggcaaagaaagacactaacagaaccaagaaccgctatggaaacatcattgcatac
gatcattctagagtgatcctgcaaccaatggaagacgacccttcctctgactacatcaac
gccaactacattgacgtaagtggcgcagcctcctccattggcgaacgtgtgcgacacaac
cgtccttctctcatatggctgtacagggatgggtatcagaggccaagtcattacattgca
actcaagggcctgtccatgagacagtctatgatttctggaggatggtctggcaagagcag
tctgcctgtatcgtcatggtcaccaacctcgtggaagttggacgggtgaagtgttacaag
tactggcccgatgatgctgaggtctatggtgatttcaaagtgacgtttgtggaagtggag
ccccttgctgaatatgtggtcagaacgttcaccttggagaggagaggctttaacgagctg
cgcgaggtgaagcagtttcatttcactggctggcctgaccacggagtgccctaccacgcc
acaggcctcctctccttcatccgccgggtcaagatttccaacccccccagcgctgggccc
atcgtggtgcactgcagcgccggagccggacgcacaggctgttacatcgtcatcgacatc
atgctggacatggcggagagggagggcgtggtggacatctacaactgtgtgaaggccctg
cgctccagacgcatcaacatggtacagactgaggagcagtacatcttcatccatgacgcc
atcctagaggcctgtctgtgtggcgagacggccatccctgcctgcgagtacaaagcagct
tactacgacatgatcaggatagactcacagagcaactcctcacacctcaaagatgaattc
cagacactgaactcggtgacccctcagccccagccagaggactgcagcatcgccctgctc
cccaggaaccacgagaagaaccgcttcatggacatgctgcctccagaccgctgtctgccc
ttcctcatcactatcgacggggagagcagtaactacatcaatgctgccctcatggatagc
tacagacagccagcagccttcatcgtaacccagcaccctctgcccaacacagtcaaggac
ttctggaggctggtgtatgactatggctgcacttccctggtgatgctcaacgagattgac
ctagcgcaggttgttgttgtcaatcagggctgccctcagtattggcctgaagaggggatg
cttcgctacggtcctgtccaagttgaatgcatgtcctgctccatggattgtgacgtcatc
agccgtctcttcagaatatgtaacctcactagacctcaggagggctatctgatggtgagg
cagttccagtacctgggctgggcagcccacagagaagtcccagcatcaaagcgttccttc
ctgaagctcatactgcaggtggacaagtggcaggaggagtgtgaagagggagagggacgc
acaatcatccactgcctaaacggaggcgggcgcagtgggatgttctgtgctatcagcatt
gtgtgtgagatgatcaagaggcagaatgtggtggacgtgttccatgcagtcaagagcctg
aggaacagcaagcccaacatggtggacagcccggatcagtaccgcttctgctacgacctt
gctctggagttcatcgagacctcttaa
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