Salvelinus sp. IW2-2015 (Arctic char): 111954456
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Entry
111954456 CDS
T05762
Name
(RefSeq) transcription factor IIIB 90 kDa subunit
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salp03021
]
111954456
Transcription machinery [BR:
salp03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
111954456
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
Motif
Other DBs
NCBI-GeneID:
111954456
NCBI-ProteinID:
XP_023829989
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All DBs
Position
LG28:complement(19116782..19253348)
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AA seq
707 aa
AA seq
DB search
MTSRICKNCGCSEIDLDQARGNAVCTSCGSVLEDNIIVSEVQFVEGSGGISSAVGQFVSA
DGPVKAPVLGTGFHTSLGKESRAQTLQNGKRQIHNLGSQLQLNQHCLDTAFNFFKMVVSK
HLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGKTFLLLARELCINSPA
IDPCLYIPRFAHMLEFGEKTHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
EFRRTVKDVIGVVKVCEATLRKRLTEFEDTPTSQLTIDEFMRVDLEQECDPPSFTAGQRK
VKMQALEQELAKKLDEVQGEISLYRDEIETELENSRPKLRGIYAAYAKEIDPLDEVLSQA
SCSSPREVDPEEDEELEAVAQHLNQDFLCQVIQGEQQGDERGGEGVTEEAPPPHPPPRGG
PSLASILGPLPSAASLGLSESIHECIAEDKDSDGKSESGELDLDGIDDNEIERYILNDKE
VRVKTDLWMKQNEEYLREQKEKEERITKEKEQGTYKEKPKKTSKKREPIRASTAGEAIEK
MLEQKKISSKINYDVLRDLNSKGGSGNSSPARPTSSEEPPSGPPGRKRLTRRKKQPNKTN
MGLATTASIMGKRLRPLISSATKKKRAASQVTPNLAPAATPVLPNLSSPPTPNPAPPGPT
MVESGPVAYDEAAEDEEEEEVEEPCVSALQLLGGNEYGCEAEEEEVF
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgacttcccgcatatgcaagaactgtggttgttccgagatcgacctcgatcaggctcgg
ggcaatgcagtatgtacgagctgtgggtctgtgctggaggacaacatcatcgtgtccgag
gtgcaattcgtggagggcagtggtgggatttcgtcagctgtggggcaattcgtctcagca
gatggtccagtgaaagccccagtccttggtactgggttccacaccagccttggaaaagag
tcccgtgctcagacgctgcagaacggcaagcggcagatccacaacctgggcagccagctg
cagctcaaccagcactgcctggacacggccttcaacttctttaagatggtggtgagcaag
cacctgacgcgcggacgcaagatggcgcacgtcatcgccgcctgcctctacttggtctgc
cgaactgagggcacgccccacatgcttctggacctgagtgatctcctacaggtgaacgtg
tacatcctagggaagaccttcctcctgctggctcgagagctctgcatcaactccccagca
atagacccttgcctgtacatccctcgtttcgcccacatgctggaatttggagagaagacc
catgaggtgtccatgacggcactgcgcctactacagaggatgaagagggactggatgcac
acgggacgcaggccctctgggctgtgtggagcagccctgctggtggctgcccggatgcac
gagttccgccgcaccgtcaaggacgtgatcggagtggtgaaagtgtgcgaggccacactg
aggaaaagattgacagagttcgaggacactcctaccagtcagctgaccatcgatgagttc
atgcgggtggatctggagcaggagtgtgacccaccctctttcactgctggacagaggaag
gtcaagatgcaggcgcttgaacaggagttagccaaaaagctggatgaagttcaaggtgaa
atcagtttgtatcgygacgagatcgagacggagctggaaaacagcaggccaaagctcaga
gggatctacgctgcatatgccaaagaaatagacccgctggacgaggtgctttctcaggcc
tcgtgctccagccccagggaggtggaccccgaggaggacgaagagctggaggcagtcgcc
caacacctgaaccaggacttcctctgccaggtcatccagggagagcagcaaggggacgaa
agagggggagaaggagtgacagaggaggcaccccctccacatccaccacccagaggaggc
ccctccctggcttccatcctgggtcccttgcctagcgcggctagcctggggctcagtgag
tccatccatgagtgcatcgcagaggacaaggacagtgatggcaagtcggagagcggggaa
ttggacctggacggcatcgacgataatgaaattgagaggtatatcctcaacgacaaagaa
gtgagagttaagacggatctgtggatgaagcagaatgaggaatatctgagggagcagaaa
gaaaaggaggagaggataactaaagagaaagagcaagggacctacaaggaaaagcccaag
aaaacgtccaagaagcgggagcccatccgtgccagtacggcgggcgaggccatcgagaag
atgctggagcagaagaagatctccagcaagatcaactacgacgtgctgcgtgaccttaac
agcaagggtggcagcggcaacagcagccctgcccgaccaacctcctcggaagagccaccc
agtggcccccctgggcggaagaggctgacccgccgcaagaagcagcccaacaagaccaat
atgggcctggccaccaccgccagcatcatgggcaaaagactccgtccacttatatcctct
gcaaccaagaagaagagagccgcttcacaggtgacccctaacctggccccggctgcaacc
cctgttctgcccaacttgtctagcccgcctacccccaacccagcccctccaggacccact
atggtggagagtggcccggtggcctatgacgaagcggcagaggatgaggaggaggaagaa
gtggaggagccctgtgtcagtgcgttgcagctcctgggaggaaacgagtacggctgtgag
gctgaagaggaagaggttttctag
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