Salvelinus sp. IW2-2015 (Arctic char): 111954496
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Entry
111954496 CDS
T05762
Symbol
rad51b
Name
(RefSeq) DNA repair protein RAD51 homolog 2 isoform X1
KO
K10869
RAD51-like protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111954496 (rad51b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salp03400
]
111954496 (rad51b)
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
111954496 (rad51b)
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Gene cluster
GFIT
Motif
Pfam:
Rad51
HHH_XRCC3_RpoA
AAA_25
ATPase
RecA_N
DnaB_C
ABC_tran
AAA_22
RAD51D_N
DUF7125
Rad17
ATPase_2
AAA_18
Motif
Other DBs
NCBI-GeneID:
111954496
NCBI-ProteinID:
XP_023830042
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Position
LG28:22563959..22632222
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AA seq
379 aa
AA seq
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MASKKLRRTGVSLEVCERLKRHQIETCQDLLSLTPLEVMCLAGQSYQQVLMLLQSVSQAC
APSMTTALEVWKQRADLFFSTSLPALDRLLQGGLPRGTLTEVTGPSGCGKSQVCMMLSVL
ATLPKYMGGLDSGVIYIDTESAFSAERLVEIAQSRFPDYFCEKERVLEMAGRVHLFRELT
CQDVLDRLERLEEDIISSKAGLVILDSVASVVRKEYDTTLPGNLTHRSNLLGQEAATLKY
LAQAFHIPVVLTNQITTHVGDRGERGAASFRGASDERDSGYVTAALGNTWSHSVNTRLIV
QYVDAHQRQIVIAKSPVAPFAVLNYTVQKEGIRLEGNGDNQEMLHQGTDPGLQPIRVRTG
FNYNLTQANPAAVGHLKRL
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtaaaaagctcagaagaacaggtgtgtcactcgaagtatgcgaacgactcaag
cgccaccaaattgaaacttgccaggacctgctgtccctcacacctctagaggtgatgtgc
ctcgcggggcagagttaccagcaggtgttgatgctgctgcaatcagtcagccaggcctgt
gccccctcaatgaccaccgcgttggaggtgtggaagcagagggctgacctgtttttctcc
acatccctacctgccctggacagactgcttcagggagggctaccacgggggacactcaca
gaggtgactggcccctcaggttgtgggaagagccaggtgtgtatgatgctcagtgtgctg
gccactctgccaaagtacatgggtggcctcgacagcggagtcatctacatagatacggag
tctgctttctcagcagagaggttagtggagattgctcagagcaggtttccagactacttc
tgtgagaaggagcgtgtgttggagatggctggacgtgtccacctttttcgggagctcacg
tgtcaggatgtcctggacagactggagaggctggaggaggacatcatctcctccaaggct
gggttggtgattcttgaytcggtggcctcagtggtgaggaaggagtatgacacaacactg
cctgggaacctcactcaccgcagcaacctgctgggccaggaggctgccaccctcaaatac
ctggctcaggcctttcacatccctgtggtcttgaccaaccagatcacgacgcatgtgggc
gatcgaggagagagaggcgctgcgtcattcaggggagcatctgatgagagggattctggg
tatgtgacggcggcgctggggaacacatggagtcatagcgtcaacacccgcctcattgtc
cagtatgtagatgcacaccaaagacagattgtgatagcgaagtcacctgtggccccgttt
gctgttctaaactacaccgtccagaaggagggcatccgtctagagggaaatggtgataac
caggaaatgttgcatcaaggcacagacccgggcctccagccgatcagagtgcggacagga
ttcaactacaacctgacacaagccaatcctgctgccgttggccacctgaagcgtctttga
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