Salvelinus sp. IW2-2015 (Arctic char): 111954498
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Entry
111954498 CDS
T05762
Name
(RefSeq) DENN domain-containing protein 4C
KO
K20163
DENN domain-containing protein 4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111954498
Membrane trafficking [BR:
salp04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
111954498
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
CA109-like
Motif
Other DBs
NCBI-GeneID:
111954498
NCBI-ProteinID:
XP_023830049
LinkDB
All DBs
Position
LG3:complement(31191265..31253151)
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AA seq
1947 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKAPITDLAVINKSAGETVPEGFT
CIESTYSAQQANLNHGSLKSHELFLCYKRDRDKPPLIDIGVLYEGKERLIQGCEVIQVTP
YGRCANVNNSSATSQRIFITLRRAPPVQPQNSLSVTDICVIVTSKGETPPHTFCKVDKNL
NCGMWGSSVFLCYKKSVSASNSINYKAGLIFRYPEDDYESFPLSESVPLFCLPMGAKIEC
WAPNTRYPLPVFSTFVLTNSSGEKMYGAAIQFYEAYPIDLLSEKQKVQLGLLTTVEKKMI
PNRTVNTNKCICLLSRWPFFESFRKFLMFLYKLSVSGPHPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLMLAQPVCTPLPLSGADYSTLLMNLGPENCATLLHFVLLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPFPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKRHSNWKNLPKKPCKSLFNSLANLHHQLGIVRRTAQEGLAVEN
TPIEADFTWHKKMTSLEMEIQEALLRFMAHILKGYRSYLKPITQAPSEKATSADSLYDLQ
GFLKSRERAHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCIEKLFPSDKGNDKG
TKVEGESSEDTKLMELDESQKSEHTVFVMPPEPPNTEDESDPPTRYSYKSFPRLRMDLFD
RPREVIPALRSSTPGASLSSSPALLAKRTKQEIKLAYKMAKRFYSDPPLWAKCLFSHCYS
LWFICLPVGVRLVQSKSWAMQQAYNVLLKMRTSEVEVLDEVCYRVVMQLCGLYGQPVMAV
RVLVEMKKAGVHPNAITYGYYNKAVLEGPWPSRNRSGLFMWAKVRNVVRTVAQFKQALHR
MPATKGPTIITPVVSVSGDRLSHGSADHSSEVNGEDHTLFARSLIIGDATDNHCSTGGQS
DQGYGSKDELHQVQVDLAQSAAPLVDVDHRSKPKAQHNGGDIAGSVDSSVVVAEPTSPVE
AIPHVPSIVKLSTGGSFDTATKRGDTGPGKLFSLRSQSEDVSLPEEGESAAPGGSGEEGP
AVQGQCQRQKAFSERSCSFSVESRAGMLMEKHGVDHIARRMGADARILAAALSGCGTTQP
PTNLPSKDLFKELESEEGRGPMLGKLSEEGPVLDPTALEGLGKEEKRMDGEDEMGLKLEE
EGDSGGSGDSSLPTLEMKEVEVGADPLSLLVSEHEELASVTSQELPHSLPAVVSRNLADE
IEMYMSLRSPLGPKSSSMEFHQGGQGGGSSPDTAPVKQALERRSSLPVPPVKHPGGSSGD
STPKRSPAAVTRSKTFTVMATRSPASSGGVVASPRSSLTALVRSSQNGSLGSVINSISGM
KMDTLLSGPKMDVLKSGMKQAGNLASKVWGAVASAYSYSDDEDELAPGYRDRDSFPAGLD
ESMLSGGGGGDSPTHRGPTQGLVSNGLTQSSTSLASSSSSSDTGRGPHSTLTPGRPGRGP
DSDQGSHHTSSSSIYQNCALEVLMSSCSLCRSCECLVYDEEIMAGWTADDSNLNTTCPFC
RTAFLPLLHVEFHDLRTNTAFYLKPSASGDSIHSASHQPTTTGSTVLKVGGAVDTPRXDL
ISFPESSSEDPGEAPASQTATHKSLVPVPEPAQSDPLGLLELQAGKRGTSLTRSNSVGGP
LQSLVSAQRQPGHGVSTTSLPCSLTEVDGLGPKRPNPMPVSVPYLSPLVLRKELETLLEN
EGDQVIYTHKFLSQHPIIFWNLVFYFCRLDLPSYLPGLILTSEHCNNGVQLPQTSLSQDS
KQVYVQLLWDNINLHQEPGDPLYQSWRTLLEKKGTLAPTDHQETRTLLNSIVRSIQTNDV
YGPINLLLREVKRHPEVKRQRGIYREILFLALVALGRENIDVEAFDREYRLAFDDLSTEQ
LKALHKIDRPPNSNVQWCLKCFGAPVI
NT seq
5844 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaggacaagggtcaccgtgtgaccgactactttgtggtggccgggctgacggac
aagtccacgccactggagcaggacctgtcggagacyaagtccagcgggcccaaggcgccc
atcactgacctggctgtcatcaacaagtcggcgggcgagacggtgccggagggcttcacc
tgcatcgagagcacctacagcgcgcagcaggccaacctcaaccacggcagccttaagagc
cacgagctgttcctctgctacaagagggaccgcgacaagcccccgctcatcgacatcggg
gtgttatacgaagggaaggagcgtctcatccagggctgtgaggtcattcaggtcacgccg
tacggccgttgtgccaacgtcaacaacagctctgctacctcacagcgtatcttcatcacc
ttacgccgcgcgccgcccgtccagccccagaactccctgtccgtcaccgacatctgcgtc
atcgtcaccagcaagggcgagacgccgccgcacaccttctgcaaggtggacaagaacctc
aattgtggcatgtggggctccagtgttttcctgtgctacaagaaatcagtgtccgcgtcc
aactccatcaattacaaagccggcctcatcttccgctacccagaggatgactatgagtca
ttccccctgtctgagtctgtgcccctgttctgcctccccatgggggctaagatcgagtgc
tgggcccccaacacacgctaccctctgcccgtcttctccacctttgtgttaaccaactcc
tctggggaaaagatgtacggcgcagccatccagttctacgaggcctaccccatagatctc
ctcagtgagaagcagaaggtgcagctgggcctgctcaccaccgtggagaagaagatgatc
cccaaccggacggtcaacaccaacaagtgcatctgcctgctctctcgctggcccttcttc
gagtctttccgcaagttcctcatgttcctctacaagctgtccgtctcgggtccccacccg
ctgcccatcgaaaagcacatctcgcacttcatgcacaacgtgtccttcccttcacctcag
aggcccagaatcttggtccaactctctgcacacgacaccttgatgctcgcacaacctgtg
tgtactcctctccctctcagtggggcagactacagtacgttgctgatgaacctgggccca
gagaactgtgccacgctgctgcactttgtcctgctggagagtaagatcctgcttcactcc
ctgagacccgctgtactcaccggggtagcagaggccgtagtggcgatgatcttcccgttc
cagtggcagtgcccgtacatccccctctgcccgctctccctggcgggggtcctcaatgcc
ccctttcccttcatcgtgggcgtggactcccgctactttgacctttatgaccccccgccg
gacgtggtctgtgtggacctggacaccaacactatttacctgtctgatgagaagagacac
agtaactggaaaaacctcccaaagaaaccctgcaagagcctgtttaactcactggccaac
ctgcaccaccagctgggcatcgtgcgtcggacagcccaggagggcttggcggtggagaat
acccccatcgaggcggacttcacctggcacaagaagatgacctccctggagatggagatc
caagaggccctgctgcgcttcatggcccacatcctgaagggctaccgttcctacctcaaa
cccatcacccaggccccctctgagaaagccacctctgcagactcactatatgacytacag
ggtttcctaaagagcagggagcgagcccaccagaagttctattcgcagctgaccaagact
cagatcttcatccgcttcatcgaggagtgcacattcgtcagcgacaaggacacaggcctt
gccttcttcgacgactgcatcgagaagctatttccctctgataaaggcaacgacaaaggc
actaaggtggagggtgagtcytcagaggacactaagctcatggaactagacgaatcacag
aagagcgagcatacagtcttcgtcatgcccccagaacctcccaacacsgaggatgaatct
gatccccctacccgctacagttataagagtttccctcggttgcgtatggacctgtttgac
cgtcccagagaggtgataccagcgctgaggagcagtacaccaggggccagcctgtccagc
agccctgcactgctggccaagaggaccaagcaggagatcaagctggcctacaagatggcc
aagcgcttctactccgaccctccactgtgggccaagtgtctgttcagccactgctacagt
ctgtggttcatctgtctgcccgtgggggtgaggctggtccagtcaaagagctgggccatg
cagcaggcctacaacgtcctgctcaagatgaggacctctgaggtggaggtcctggatgag
gtgtgttaccgtgtagtgatgcagctgtgtggtttgtacggtcagccggtcatggccgtc
cgtgttctggtggagatgaagaaggcaggggtgcaccctaacgctatcacctatggctac
tacaacaaggctgttctggaaggcccctggccaagtcggaaccgcagyggtctcttcatg
tgggccaaggttcgcaacgtggtgcgcactgtggcccaatttaaacaggcactccaccgg
atgcccgccacgaaaggacctaccatcatcacgccagtggtgtcagtgagtggtgaccgg
ctgagccacgggagtgcagaccactccagtgaggtgaacggagaggatcacacgctgttc
gcccgcagcctcatcataggagatgccacggacaaccactgcagtacaggaggtcagtct
gaccagggctacggctctaaagatgagttgcatcaggtgcaagtggatttggctcaatca
gcagcccctcttgtcgatgtggatcaccgcagcaagcccaaagcacagcacaatggtggg
gacatagctggctcggtggacagttctgtggtcgtagcggagcccaccagccctgttgaa
gccatcccacatgtccccagcatcgtcaagctgtccacaggagggagcttcgataccgcc
acgaagagaggagacactggcccagggaagctgttctctctgcgcagccagagtgaggat
gtctctctgccggaggagggtgagtctgcagccccgggtggctctggggaggaggggcct
gcagttcaggggcagtgccagcgccagaaggccttctcggagcgcagctgcagcttcagc
gtcgagagtcgtgccggcatgctgatggagaaacatggcgtggaccacattgcgagacgc
atgggcgccgatgcccgaatcctcgccgctgccctttctgggtgtggcaccacccaaccg
cctacaaatctgccatccaaggacctttttaaggagttggagtcagaggaggggcgtggt
ccgatgctggggaaactgtcagaggagggtcctgtactggacccaaccgcactggagggg
ctagggaaagaggagaagagaatggacggggaggatgagatgggactgaagttggaggag
gaaggagattcaggggggagtggtgatagctctctgccaaccctggagatgaaggaggtg
gaggtcggggctgatcccctctccctgctggtctcagagcacgaagagttggcgtccgta
accagccaggagctgccgcactccctgcccgccgtggtgtcccgaaacctggcagacgaa
attgagatgtacatgagcctgcgaagcccactgggccccaagtcctccagtatggagttc
caccaggggggccagggagggggctcttccccggacactgccccagttaagcaagctcta
gaacggaggtccagcctccctgtgccccctgtcaaacacccagggggttcaagcggggac
tcgacgcccaaacgcagccctgccgctgtcacgcgctccaagaccttcaccgttatggcc
accaggagccccgcctcttccggcggtgttgtggccagcccgaggtcgtcactgacggcg
ctggtgaggtcatcgcaaaacggctcgctgggctcggtcatcaactccatctcaggcatg
aagatggacaccttgctctctggtcccaagatggacgtgttgaagtcaggcatgaagcag
gcagggaacctggccagcaaagtgtggggggccgtggcctcagcctattcctactccgat
gacgaggatgagctggccccgggctacagggatagggatagtttccctgccgggctggat
gagtccatgctgtcagggggtggaggaggggacagtcccacccacagagggccaacccaa
ggcctggtgtccaacggactgacacagagcagcaccagcctggccagcagcagtagcagc
agtgacacagggagaggacctcactccacactgactccaggacggccagggagaggtcca
gactctgatcaaggctcccaccacaccagctcctcaagtatctaccaaaactgtgcccta
gaggtgctgatgtccagctgctccctgtgtcggtcgtgtgagtgtctggtgtacgacgag
gagatcatggcaggatggacggcagacgactccaacctcaacaccacctgtcctttctgc
cgcaccgccttcctgcctctgctccacgttgagttccacgacctgcgcaccaacacagcg
ttctacctgaagcccagtgcatcaggagacagtatccacagcgccagccaccagcccaca
actacgggttccactgtgctcaaggtggggggtgcagtagacaccccgcgccyggacctc
atcagcttcccagaatcctcctctgaggacccaggggaggccccggccagccaaaccgcc
actcacaagagtttggtaccggtaccggagccggctcagtcggaccctctgggcttgctg
gaactccaggcagggaagcgggggacgtctctgacgcgcagtaacagcgtgggcgggcca
ctacagagcctggtctctgcccagagacaacccggacacggcgtgtccaccaccagcctg
ccctgcagcctgacagaggtggatggcctgggaccaaagcggcccaaccccatgccagtg
tctgtgccctacctcagccccctggtcctccgcaaagaactggagaccctactagagaac
gagggggaccaggtgatctacacccataaattcctgagtcagcaccccatcatcttctgg
aacctggtgttttatttctgtcgcctggacctgcccagctacctgcctggcctcatcctc
acctcagaacactgcaacaacggagtacagctcccccagacctccctgtcccaggacagt
aaacaggtgtatgtgcagctgctgtgggacaacatcaacctgcaccaggagcctggcgat
cccctctaccagagctggaggaccctgctggagaagaagggcaccctggcccccacggac
catcaggagacacggaccctcctcaacagcatcgtccgcagcatccagaccaacgacgta
tatggccccatcaatttgctcctccgagaggtcaagcggcacccagaggtcaaacgccaa
aggggtatctatagggagatcctcttcctggcgcttgtggcattgggacgggagaacatt
gacgtcgaggcctttgaccgtgaataccgcctggcctttgatgatctgagcacagagcag
ctcaaggccctgcacaagattgaccggccacccaacagcaatgtccagtggtgcctcaag
tgctttggagctccagtcatctga
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