Salvelinus sp. IW2-2015 (Arctic char): 111954558
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Entry
111954558 CDS
T05762
Name
(RefSeq) paired box protein Pax-1-like
KO
K09382
paired box protein 1/9
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111954558
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
111954558
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_SB
HTH_29
Motif
Other DBs
NCBI-GeneID:
111954558
NCBI-ProteinID:
XP_023830146
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Position
LG28:complement(5840266..5844734)
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AA seq
353 aa
AA seq
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MDQTYGEVNQLGGVFVNGRPLPNSIRIRIVELAQLGIRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPNVVKSIRDYKQGDPGIFAWEIRDRLLADAVCDKYNVPSV
SSISRILRNKIGNLSQPGQYENSKPTHPQLSYNHMYPYSYPSAMSPTGTKIGSGHGVPIT
AGHVSLSRHGWPSVHTVSNILGIRAFMDPSAIAGAEGYQSKMEEWASVNRATFSSAHGVN
GIEKSSLEADIKYHQSSSNLSSYVPACAYSPPNQYGVYGGPAANYMTTGHHWQSQSASLA
HPNSGATMQGGDLHTAMSFKHSSREGDRKPHSPLSKHQHEALNVHGLSLPTSA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaacatatggagaagtaaaccagcttggcggggtatttgtcaacgggcgacca
cttccaaattcgattcggatcagaatcgtggaattagctcaacttggaatacgaccctgt
gacatcagtagacagcttcgagtctctcatggctgcgtgagcaagatactagcgaggtat
aacgagacgggttcgatattgcccggtgccataggaggaagtaaaccccgggtcacaaca
cccaacgtggtgaaaagcataagggattacaaacaaggagaccctggaatatttgcttgg
gagatcagggacaggcttcttgcagatgcagtttgtgataaatataacgttccctccgtc
agctccataagccgcattttacgcaacaaaataggaaatctttctcagccgggccagtat
gagaacagcaagccaacccatcctcagctatcctacaaccacatgtacccgtactcatac
cccagtgcaatgtcacccactgggactaaaattggcagcggtcacggtgtacccatcaca
gcgggccatgtcagcctctcccgtcatggatggccttcggtgcacacagtcagcaacatt
ttgggcattcgagccttcatggacccctcagccattgctggagcagaggggtaccaatca
aaaatggaggagtgggcgagcgttaacagagcgactttttcctctgcccatggcgtcaac
ggaatagagaaatcatccctagaggcagacattaagtatcatcagtcttcttcaaaccta
tctagttatgtacctgcttgtgcctactctcccccaaaccaatacggggtgtatggtggg
ccagcagctaactacatgacaacaggacaccactggcagtctcagagcgcaagcctggcc
caccccaacagcggagcaaccatgcaaggtggagacctccacacggcaatgtctttcaaa
cactcatcacgagaaggagacagaaaacctcacagtcccttgagcaagcaccagcacgag
gcgttgaacgtacacggactctccctcccgacctcagcttaa
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