Salvelinus sp. IW2-2015 (Arctic char): 111954649
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Entry
111954649 CDS
T05762
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
111954649
Enzymes [BR:
salp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
111954649
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Motif
Pfam:
GDPD
CBM_20
C2_GDE1
TreTu_C
Motif
Other DBs
NCBI-GeneID:
111954649
NCBI-ProteinID:
XP_023830293
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All DBs
Position
LG28:27084526..27103473
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AA seq
670 aa
AA seq
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METTQVTLAVRGDTSPGEVIAVVGSCEALGGWCHQRAVTLQPAEHDGTLWKRTVSVPRGA
VPTYRYFKGHFLESKSAGGPCQVIVTKWETHQQPRLMSPTESHLDIDDGQFGFHNGSACI
DSGWLTCQTEIRLRLHYSKTSPVSITKKKYKKSRFRIKLTLEGVEEDEEDDEPEQSAASW
HKMTTTLETSMISGDGYKSRHSQPECGYALVASQWTEYVIHTMDPDNLELTFDFFEEDMG
EHVMPGDAHPGTAGTACLLSSFFVESGKDTGVVTLPIMKRNSRQTLGKVRVDYLVIRPIE
GLQCDMSSSFTKYWRKRSAPLDVGHRGAGSTHAAKHTKVRENTIASFKSAANHGAAYVEF
DVHLSKDCVPIVYHDLTCCISTKKKGDKHSLERFEVPVKDLTYDQLQQLKLGHASALKVN
DHKDDDDEEEVDEHQPFPSFSQIFHAVPENVGFNIELKWICQMKDGSWEGNLSSYFNMNL
FLDIILSCVLQRAGKRRIVFSCFDPDVCTMVRQKQNKYPILFLTQGISETYPELMDIRCR
TTQIAMSFAQSENILGISAHTEELLQNLEHIREAQSKGLVVFCWGDLNNDHDNRTKLREQ
GIDGLIYDRICDDQVEQANIFKVEEKHTLQETLKSFVCSCYSIPCQAPVCVTAAKVHNGS
AESDSGLSSS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggagacaactcaagtgactttggcagttaggggagacacatccccaggtgaggtgata
gctgtggttggtagctgtgaagctttaggaggctggtgccatcaaagagctgtgacccta
caaccggctgaacacgatgggacattgtggaagaggaccgtcagtgtgcccagaggtgct
gtgccaacctatcgttacttcaaaggccacttcctggagtcaaagagtgcaggtggtccc
tgtcaggtgatagtcactaagtgggagacccatcagcagccacgtctgatgagccccaca
gaatcacaccttgatattgacgatggccaatttggattccacaacggctcggcgtgtata
gactctgggtggctgacgtgccagacagagatccgtctgcgtctgcactactccaagacg
tctcccgtctccatcaccaagaagaaatacaagaagtctcgcttcaggatcaagctgacg
cttgagggtgtggaggaggatgaggaagatgacgagccggagcagagcgccgcgtcgtgg
cacaagatgaccaccacgctggagaccagtatgatcagtggagatgggtacaagtcccgc
cactcccagcccgagtgtggctacgccctggtggcctcacagtggacagagtacgtcatt
cacaccatggaccccgacaacctggaactcacctttgacttctttgaggaagacatgggt
gagcacgtgatgccaggggatgcccacccagggacggcgggtacggcctgcctcctctcc
tcattcttcgtggagagtggcaaggacacgggtgtggtcactctgcccatcatgaaacgc
aactccagacagaccctgggcaaagtcagagtggactacctggtgatccgtcctatcgag
ggactgcagtgtgacatgagctcctccttcaccaagtactggaggaagaggagtgccccc
ctggacgtaggccacagaggggccggcagcacacacgcagccaaacataccaaagtcagg
gagaacaccattgcttcgttcaaaagtgctgccaatcatggggctgcctatgtggagttt
gacgtccatctctccaaggactgtgtccccatcgtgtaccacgatctcacctgttgcatc
tccacgaagaagaaaggagacaagcactctttggagcggtttgaagttccggtgaaagat
ctcacatacgaccagctacagcagctcaagctgggccatgcttctgccttgaaggtgaac
gaccacaaagatgatgacgacgaggaagaggttgacgaacaccagcccttcccttcattc
tcacagatcttccacgcggtgcctgaaaacgtgggcttcaacatcgagctcaagtggatt
tgtcagatgaaggatggttcgtgggaaggaaacctgtcttcctacttcaacatgaacctg
ttcctggacatcatactgagctgtgtgctgcagagagccggcaagagacgcatcgtcttc
tcctgcttcgaccctgacgtctgcactatggttcgtcagaagcagaacaagtaccctatc
ttgttcctgacccagggcatctctgaaacctatcctgagctcatggacatccgctgtcgg
accacacagatcgccatgagctttgcgcagagcgaaaacatcctgggtatcagtgcccac
acagaggagctgcttcagaacctggagcacatccgagaggcccaatctaaaggcctggtg
gtgttctgctggggagacctcaacaacgaccacgacaacaggaccaagctacgggagcag
ggcatcgacggactcatctatgacaggatctgtgacgaccaggttgagcaggccaacatc
ttcaaagtagaggagaagcacactctgcaggagactctcaagagctttgtgtgctcctgt
tactccatcccctgccaggcgcctgtctgcgtcaccgccgccaaggttcacaacggcagt
gccgagtccgactcgggcctcagctcttcctga
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