Salvelinus sp. IW2-2015 (Arctic char): 111954702
Help
Entry
111954702 CDS
T05762
Name
(RefSeq) iroquois-class homeodomain protein irx-1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111954702
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
111954702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
111954702
NCBI-ProteinID:
XP_023830357
LinkDB
All DBs
Position
LG30:complement(7914653..7918611)
Genome browser
AA seq
457 aa
AA seq
DB search
MSFSQLGYSQFLSGSQEVYGGDRAGLGRDGGADGGVNQAATAAAVSSMLGMYGNPWAAQN
YSAFLPYSGADLALISQMNPQYDLKDSPGTHPGGLAVHASAGFYPYGQYGYGDPNRAKAA
TRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWG
RSAEDRDGRIFSSDNEDEPEKHGSEDEEEEEIDLESIDIDKVEENPGDQREVEGEGKLAA
RDASDSDSLESQRTMSVKALRSTEGPISLIKAPVGPCKNAVDLSPNAPVCQRPPQNKPKI
WSLAETATSPDSSIKPSPAVSIPHQATIPSHHPALLPGHGIYTCQIGKQLHNWANAAFLS
ANSLLGVRSLLGAANPAGHHMPLHGALNHQDARLTQASGASCTEEESGDESLESFSPKRD
DDVNIRRSGSPKSPFQLITDRSHHGTVQRALSTISTI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctcgcagctggggtactcccagtttctaagtggctcccaggaggtttacggg
ggcgaccgggccggcttaggccgggatggaggcgcggatggcggcgtgaatcaggcagct
actgccgctgctgttagctcgatgctggggatgtatggtaacccgtgggcggctcagaac
tacagcgcgtttctcccctacagcggtgcagacctcgccctcatatcgcaaatgaaccct
cagtacgatctgaaggacagcccaggaacccacccgggaggtctggctgtccacgccagc
gcagggttctacccgtacggccagtatggctatggcgacccgaaccgagccaaggccgct
acgagggagaccaccagcactctgaaggcctggttgcaggaacaccagaagaacccgtac
cccaccaagggagagaagatcatgctggccatcatcaccaagatgacactcacacaggtg
tccacgtggttcgccaacgcgcgccggcgtctgaagaaggagaacaaggtgacgtggggc
cgcagcgcggaggaccgggatggacggatcttcagcagcgacaatgaggacgagcctgaa
aaacacgggagcgaggatgaagaggaggaggagatcgatttagaaagtatcgacatcgat
aaagtcgaggagaacccaggagatcagagggaagtggagggagaggggaagttggccgcc
agggacgcatcggattctgatagcttggagagccagaggacgatgtctgtcaaggccctc
agaagtacggaggggcctatttctctcattaaggcgcctgttggtccttgtaaaaacgct
gtggatctttcccccaatgcaccggtgtgccagaggcccccacagaacaaacccaaaatc
tggtctctggctgagacggccacaagccccgacagttccatcaaaccttccccggctgtc
tcgattcctcaccaggccacgatcccctcccaccacccggccctactcccgggtcatgga
atatacacatgccagatcgggaagcagctccacaactgggccaacgcggcgttcctcagc
gccaactctctgctgggtgtcaggtcgcttcttggcgcggcaaacccagccggacaccac
atgcctctccatggcgcgctgaaccatcaggacgcacggttgacgcaggcctcaggggca
tcgtgcacagaggaggagagtggagatgagtcgttggagagcttcagtccaaagcgagat
gatgacgtgaatattcgcaggtctggctcgccgaagtctcccttccagctgattactgac
agatctcaccatggaacggtgcagcgggccctctcgacaatttccacaatatga
DBGET
integrated database retrieval system
