Salvelinus sp. IW2-2015 (Arctic char): 111954832
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Entry
111954832 CDS
T05762
Name
(RefSeq) perforin-1
KO
K07818
perforin 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
111954832
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Motif
Pfam:
MACPF
Motif
Other DBs
NCBI-GeneID:
111954832
NCBI-ProteinID:
XP_023830508
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Position
LG30:15643958..15646688
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AA seq
489 aa
AA seq
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MRVMKELCLLLLICWAGTLQCLAGSLRGKIPGKPQECKQAEFVPGYNLAGEGFDIVKMQR
KGSYVIDMENWEREGDTCELGVNFYLGGVKQKLPAAMANWRALTDCKREVSSSIYESSES
LINTTTSAVTNNWKLGLDLEMKGVKFNTIIGGTDSREATYVIAKSKQDRYSFTRHEVHCS
IYRYSLVEDPPLHKQFLNSVKKLPTVYDLNSKPAYRNLIDTYGTHFTSQVNLGGKVSAVT
SIKSCQATMNGLTITAVKDCLDVEASLSYQFIASLTAELHYCNELKKKLGTNQSFNSMFS
DRHSEIKGGVVNGGDLLFSGALGAKAYKEWLESLKTIPDVVHYSLKPLHFLLKSEHPAQP
GLKKAVEEYILENALIKKCSGSCQIGTRTSKRDHCACVCNSDQSIKSNCCPAGKGLARLQ
VYRLRAKGLYGDILTKTDGFVEISYDKQVKLTEVIKDHLQLPAATSVRTNSDCGRDDVIY
TSATPSPAG
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagggtgatgaaggagctgtgtctacttttactgatctgctgggcaggcacactccag
tgcctggcagggagtttgaggggaaagattcctggcaagccacaggaatgtaagcaggcc
gagtttgtccctggttacaacctggcaggggaaggtttcgacattgtgaagatgcagcga
aaaggttcttatgtgatcgacatggaaaattgggagagggagggagacacttgcgagtta
ggtgtcaatttctatttgggtggagtaaaacagaagcttccagcagccatggcaaactgg
agagccctcaccgactgcaagcgggaggtctcaagcagcatctatgaatccagtgagtcc
ctcatcaataccacaacttcagccgtgaccaacaactggaaacttggcctggaccttgag
atgaagggagtaaagttcaatacaatcattggagggacagattccagagaagcaacatat
gtcattgcaaagtcgaagcaggacagatacagtttcaccaggcatgaagtccattgtagc
atctacagatatagcctggtcgaagatcctcctcttcacaaacaatttctgaattcggtg
aagaagctccccactgtttatgacctcaattctaagccggcctatagaaacctgatagac
acatacggcactcatttcacctctcaagtcaacctgggagggaaagtgagcgctgtaact
tccatcaagtcttgtcaggcgactatgaacggactgacaatcactgcagtgaaggactgt
ctcgatgtcgaggcctccttgtcatatcaattcatcgctagtttgaccgccgagcttcac
tactgtaatgaactaaagaagaaacttggcaccaaccaaagtttcaacagcatgttcagt
gaccgccactcagaaattaaaggaggggtagtaaatggaggcgacctgctgttctcaggt
gcgttgggcgcaaaggcctacaaagagtggctggagtccttgaaaacaatccctgacgtg
gtgcactactcccttaagccccttcacttcctgttgaaaagtgaacatcctgctcaacct
gggctgaagaaagcagtggaggagtacatccttgaaaacgccctgataaagaaatgctca
gggtcctgtcagataggtacgaggaccagcaaaagggatcactgtgcctgtgtctgcaac
agtgatcagagcatcaagtccaactgttgccctgctgggaaaggcctggccaggctgcaa
gtctatcgtttgagagcaaagggcctatacggggacatcttaaccaaaacggatggtttt
gttgagatctcatatgataaacaagtcaaactcactgaagtgatcaaagatcacttacaa
cttccggctgctacatctgtccgtacaaactctgattgtggacgcgatgacgtcatctac
acgtccgccactccctcaccggcaggttaa
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