KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111954920
Entry
111954920         CDS       T05762                                 
Name
(RefSeq) sorting nexin-27
  KO
K17936  sorting nexin-27
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:salp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:salp04131]
    111954920
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:salp04990]
    111954920
Membrane trafficking [BR:salp04131]
 Protein recycling
  Others
   Others
    111954920
Domain-containing proteins not elsewhere classified [BR:salp04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   111954920
SSDB
Motif
Pfam: PX PDZ PDZ_6 RA SNX17-27-31_F1_FERM RA_2 PDZ_2 SNX17_FERM_C USP7_C2 Beta-prop_CATSPERE SNX17-31_F2_FERM
Other DBs
NCBI-GeneID: 111954920
NCBI-ProteinID: XP_023830617
LinkDB
Position
LG30:complement(24672584..24713613)
AA seq 564 aa
MADVEGDEIKSALPSASRNGPAAGSVVGTGVQNATQVTSGPRMVRIVKSESGYGFNVRGQ
VSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVSVEGATHKQVVDL
IRAGERELVLSVLSVPPQEADGLEAGDESAAQLSYDYSDKQAVPISIPTFKHVEQHAERF
VVYNVYMSGRQLCSKRYREFAILNQNLKREFASYTFPKIPGKWPFSLSEQQLDTRRRGLE
EYLERVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIALPDKTILSVRVRKNSTTDQV
YQALVMKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPCTCLALRKW
LFTSQEEELLRDNPLAVHYCFHQALDDVKKGFIKTEDNSYQLTKLAEQRKMAMYLSLLRS
CEGYNEVMFPHCACDSRRKGHVITAISMHHFKLHACTEDGTLENQVIAFEWVEMQRWDTD
EEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKQVEEEASDKDNQNCS
NNEYLPALETQKGWRHLGGEIATS
NT seq 1695 nt   +upstreamnt  +downstreamnt
atggcggatgttgaaggcgatgaaattaagtcggctctcccttcggcttcccgtaatgga
cccgctgcaggttcggtagtcggtaccggagtccaaaatgctacccaagtgacgtcaggt
ccacgaatggttagaattgtaaagtcggaatcaggatatggattcaatgttcgtggacaa
gttagcgaaggaggacaactgcgaagcatcaatggggaattgtacgcacctcttcagcat
gtcagtgctgttttgcctggaggggcagcggaccgagctggcatatcaaagggtgacagg
attctggaggttaatggtgtgagcgtggagggggccacccacaagcaggtggtggatctg
atccgggccggggagagggagctggtgctttctgtgctgtctgtgccgccccaggaggca
gacggtcttgaggccggggatgagagcgccgcccagctcagctatgactacagcgacaag
caggccgtgcccatctccatccccacattcaagcacgtggagcagcacgccgagaggttt
gtggtgtacaacgtgtacatgtcgggcaggcagctgtgctccaagcgctaccgggagttt
gctatcctgaaccagaacctgaagagggagtttgccagttacaccttccccaagatccca
gggaagtggcccttctccctgtctgagcagcagctggacacacgccgcaggggcctggag
gagtacctggagagagtttgttcagtacgggtgattggtgagagtgacatcatgcaggaa
ttcctttctgaatcagatgagaattacaatggcgtttcagacgtggagctgcggatagcc
ctgccagacaagaccatcctctctgtcagggtgcgcaagaacagcacaactgaccaagtc
taccaggctttagtgatgaaggttggtatggacagcatcatggccagctactttgccctc
tttgaagtcatcaaccactcctttgtgcgaaaactggcccccaacgagtttccccacaag
ctgtacgtgcagaactacacatcagctgtgccgtgcacctgtctggccctccgcaagtgg
cttttcacatctcaggaggaggaacttctcagggacaacccgctggccgtccactactgc
ttccaccaggcattggatgacgtgaagaagggattcatcaaaacagaagacaattcttac
cagctgacgaaactggcagagcagcgcaagatggccatgtacctgagtctgctgcgctcc
tgtgagggctacaacgaggtcatgttcccccactgcgcctgtgactcccggaggaagggc
catgtcatcacagccatcagcatgcaccacttcaaactgcacgcctgcacagaggacggc
acgcttgagaaccaggtgatagcgtttgagtgggtggagatgcagcgctgggacactgac
gaggagggcatggcgttctgctttgagtacgccaggggggagaagaaacctcgctgggtc
aagatcttcacaccatacttcaactacatgcatgagtgcttcgagagggtcttctgtgag
ctcaagtggaggaaacaggttgaagaggaagcctctgacaaagacaaccagaactgcagt
aacaacgaatatctccctgctctggagacacagaagggatggcgccatctagggggcgag
atcgccacatcctaa

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