Salvelinus sp. IW2-2015 (Arctic char): 111954920
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Entry
111954920 CDS
T05762
Name
(RefSeq) sorting nexin-27
KO
K17936
sorting nexin-27
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111954920
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
salp04990
]
111954920
Membrane trafficking [BR:
salp04131
]
Protein recycling
Others
Others
111954920
Domain-containing proteins not elsewhere classified [BR:
salp04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
111954920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
SNX17-27-31_F1_FERM
RA_2
PDZ_2
SNX17_FERM_C
USP7_C2
Beta-prop_CATSPERE
SNX17-31_F2_FERM
Motif
Other DBs
NCBI-GeneID:
111954920
NCBI-ProteinID:
XP_023830617
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Position
LG30:complement(24672584..24713613)
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AA seq
564 aa
AA seq
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MADVEGDEIKSALPSASRNGPAAGSVVGTGVQNATQVTSGPRMVRIVKSESGYGFNVRGQ
VSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVSVEGATHKQVVDL
IRAGERELVLSVLSVPPQEADGLEAGDESAAQLSYDYSDKQAVPISIPTFKHVEQHAERF
VVYNVYMSGRQLCSKRYREFAILNQNLKREFASYTFPKIPGKWPFSLSEQQLDTRRRGLE
EYLERVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIALPDKTILSVRVRKNSTTDQV
YQALVMKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPCTCLALRKW
LFTSQEEELLRDNPLAVHYCFHQALDDVKKGFIKTEDNSYQLTKLAEQRKMAMYLSLLRS
CEGYNEVMFPHCACDSRRKGHVITAISMHHFKLHACTEDGTLENQVIAFEWVEMQRWDTD
EEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKQVEEEASDKDNQNCS
NNEYLPALETQKGWRHLGGEIATS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgttgaaggcgatgaaattaagtcggctctcccttcggcttcccgtaatgga
cccgctgcaggttcggtagtcggtaccggagtccaaaatgctacccaagtgacgtcaggt
ccacgaatggttagaattgtaaagtcggaatcaggatatggattcaatgttcgtggacaa
gttagcgaaggaggacaactgcgaagcatcaatggggaattgtacgcacctcttcagcat
gtcagtgctgttttgcctggaggggcagcggaccgagctggcatatcaaagggtgacagg
attctggaggttaatggtgtgagcgtggagggggccacccacaagcaggtggtggatctg
atccgggccggggagagggagctggtgctttctgtgctgtctgtgccgccccaggaggca
gacggtcttgaggccggggatgagagcgccgcccagctcagctatgactacagcgacaag
caggccgtgcccatctccatccccacattcaagcacgtggagcagcacgccgagaggttt
gtggtgtacaacgtgtacatgtcgggcaggcagctgtgctccaagcgctaccgggagttt
gctatcctgaaccagaacctgaagagggagtttgccagttacaccttccccaagatccca
gggaagtggcccttctccctgtctgagcagcagctggacacacgccgcaggggcctggag
gagtacctggagagagtttgttcagtacgggtgattggtgagagtgacatcatgcaggaa
ttcctttctgaatcagatgagaattacaatggcgtttcagacgtggagctgcggatagcc
ctgccagacaagaccatcctctctgtcagggtgcgcaagaacagcacaactgaccaagtc
taccaggctttagtgatgaaggttggtatggacagcatcatggccagctactttgccctc
tttgaagtcatcaaccactcctttgtgcgaaaactggcccccaacgagtttccccacaag
ctgtacgtgcagaactacacatcagctgtgccgtgcacctgtctggccctccgcaagtgg
cttttcacatctcaggaggaggaacttctcagggacaacccgctggccgtccactactgc
ttccaccaggcattggatgacgtgaagaagggattcatcaaaacagaagacaattcttac
cagctgacgaaactggcagagcagcgcaagatggccatgtacctgagtctgctgcgctcc
tgtgagggctacaacgaggtcatgttcccccactgcgcctgtgactcccggaggaagggc
catgtcatcacagccatcagcatgcaccacttcaaactgcacgcctgcacagaggacggc
acgcttgagaaccaggtgatagcgtttgagtgggtggagatgcagcgctgggacactgac
gaggagggcatggcgttctgctttgagtacgccaggggggagaagaaacctcgctgggtc
aagatcttcacaccatacttcaactacatgcatgagtgcttcgagagggtcttctgtgag
ctcaagtggaggaaacaggttgaagaggaagcctctgacaaagacaaccagaactgcagt
aacaacgaatatctccctgctctggagacacagaagggatggcgccatctagggggcgag
atcgccacatcctaa
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