Salvelinus sp. IW2-2015 (Arctic char): 111954963
Help
Entry
111954963 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin-X-like
KO
K06252
tenascin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04510
Focal adhesion
salp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111954963
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111954963
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
salp00536
]
111954963
Glycosaminoglycan binding proteins [BR:
salp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111954963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
EGF_2
EGF_Tenascin
hEGF
Pur_ac_phosph_N
EGF
Motif
Other DBs
NCBI-GeneID:
111954963
NCBI-ProteinID:
XP_023830711
LinkDB
All DBs
Position
LG30:complement(17513305..17540028)
Genome browser
AA seq
1205 aa
AA seq
DB search
MPLVPSFLILLLTCPALLTPSGSQSLQPGGQRAPRDTKPEGGGQPIKVVISEACVQGDSS
QTQGKELDLEPGSALVLTHRIRLVPGSCAGGCEAEFAALRDRLERLEKEVSSLREKCGGP
EGGCCTSQQSKGAECSIKPEGDECPNECSDQGRCEDGKCVCFPGFSGPDCSLSDCPGNCN
DKGKCVSGQCVCDPGFTGPDCSSESCPGNCNNKGRCVNGQCVCDDTGLHRPDCSSESCPG
NCNNKGRCVNGQCVCDPGFTGPDCFSESCPGNCNNKGRCCERAVCVXHGFTGPDCSSESC
PGNCNNKGRCVNGQCVLXHWFHRPDCFSESCPGNCNNKGRCVNGQCVCGPSFTGPDCSSE
SCPGNCNNKGRCVNGQCVCDTGFTGPDCSTKACPGNCKNGGKCVNGKCVCDSGFTGPDCS
TRSCPGNCSNRGKCVNGQCVCDSGFTGPDCSAKACPNNCSNKGRCVNGKCVCEVGFSGQD
CAAKGCPDNCSNKGRCVKGRCVCRRGFAPPDCSQCEAGFTGADCGTAMSGVSQLNTKDVT
ESSVTLFWTPPPVQYDTYHVTFASQKEGDQQITSQVGGKLTTYTQTGLAAGHEYTVTIKG
EINRRMSTESTAEFTTLISGPTHLRVVKTTTTSAVVQWEQSQGDIDRYRLTVAPNQTDGT
AKGRQDLTLPPERDSAQIDGLDPGHLYDITLVAEKGGIKSKPATVQVTPGPEPPSGLVFS
EVTETSLSVSWTKPKSPVSGFKVTYTNTQEGEPLSATVDSGDSTLALSKLSPGSSYEVSV
ISVLGLDESDAIKDLVMTLPDPPRDLRAINVTDTKALLLWRPALATVDRYVIVYGSEKGS
DDAEITVSGNAAEQQLKGLQGSTMYTVTVTSQLGNLDSSAAITVFTTTGGSRGDGEVXRD
LKASQVTPRSALLTWKAPSAAVGSYKLTYQTEGQEMQEVTIDSTVTEFKLIRLHPMSKYT
VQLQGERGGSYTAKISTEFTTGNLRYPFPSDCSQELLNGIHESGEVEIFPKGRQGKPVLV
YCDQVTDGGGWTVFQRRMDGKTDFFRGWKNYSKGFGELSGEFWLGNENLHNLTSMAPMTL
RVDLRAGDESAFAKYSAFTVDTVRRNYALKVSGYSGTAGDSMSYHNARMFSTRDRDPTPF
ITRCAMSYKGGWWYKNCHEANLNGLYDTSVNHQGVIWTAWKGKDLSIPFTEMKLRPTSFT
PPTQG
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttgtcccatccttcctcatcctgctcctcacctgccctgccctcctgacccca
tcaggttcccagagcctgcagcctgggggtcaaagggcacccagggacacaaagccagag
ggtggcgggcagccaatcaaagtagtgatctctgaggcgtgtgttcagggggactccagt
cagacccagggcaaggaactggaccttgagcctggttctgctctagtccttacccatcgg
atccgactggttccggggtcgtgcgcaggcgggtgcgaggccgagtttgctgccctgcga
gaccgtctggagaggctggagaaggaggtgtcatcattgagggagaagtgtggaggccca
gaggggggctgctgcacgtcccagcagagtaaaggtgcagagtgctccatcaagccggag
ggagacgagtgtcctaatgagtgcagtgaccagggacgctgtgaggacggcaagtgtgtc
tgcttcccagggttcagtggacccgactgcagtttgtctgactgccccggcaactgcaat
gacaaggggaagtgtgtgagcggccagtgtgtgtgcgacccaggtttcacagggccagac
tgctcttcagagtcctgtcctggaaactgtaacaacaagggcagatgtgtgaacgggcag
tgtgtgtgtgatgacactggtttacaccggccagactgctcttcagagtcctgtcctgga
aactgtaacaacaagggcagatgtgtgaacgggcagtgtgtgtgtgacccaggtttcaca
gggccagactgcttttcagagtcctgtcctggaaactgtaacaacaagggaagatgttgt
gaacgggcagtgtgtgtgtgacacggtttcacagggccagactgctcttcagagtcctgt
cctggaaactgtaacaacaagggaagatgtgtgaacgggcagtgtgtgttgtgacactgg
tttcacaggccagactgcttttcagagtcctgtcctggaaactgtaacaacaagggaaga
tgtgtgaacgggcagtgtgtgtgtggacccagtttcacagggccagactgctcttcagag
tcctgtcctggaaactgtaacaacaagggaagatgtgtgaacgggcagtgtgtgtgtgac
actggcttcacaggcccagactgctccaccaaggcatgtcctggaaactgcaaaaacggg
gggaagtgtgtgaacggtaagtgtgtgtgtgatagcggttttacaggcccagactgctcc
accaggtcctgccctggcaactgcagcaaccgtggaaagtgtgtgaacggccaatgtgtc
tgcgatagcggctttacggggccggactgttccgccaaagcatgtcccaataactgcagc
aacaagggaaggtgcgtgaacgggaagtgcgtgtgtgaagtgggcttcagcggacaggac
tgcgctgctaagggctgtcccgataactgcagcaacaaagggcgctgcgtgaaggggagg
tgtgtgtgtcgccgtggtttcgcccccccggactgcagccagtgtgaagctgggttcact
ggagctgactgtggcaccgccatgtctggtgtgtcccagctcaacaccaaggacgtcact
gaatcctctgtcaccctcttctggaccccacctccagtccagtatgacacctaccacgtc
accttcgccagccagaaagagggcgatcaacagataacatctcaagttggagggaagctc
acgacctacacccaaacaggactggcggccgggcatgagtacacggtgacaatcaaggga
gaaataaataggagaatgagcactgagagcacagcagaattcacaacccttatctctgga
cccacacaccttcgagttgtgaagacaaccacaacatctgcagttgtccaatgggaacaa
tcgcaaggagacatcgacaggtatcgcttaactgttgcacccaatcagacagacggaaca
gccaagggaagacaagacctaaccctgccccctgagagggactctgcccagattgacggt
ttggacccaggacatttgtatgacatcacgctagtggctgaaaagggcgggatcaagagc
aarccagcaacagtccaagtcactcctggtccagagcctccctcgggtcttgtcttcagt
gaagtgactgagacgtctctctctgtgtcctggaccaagccaaaaagtccagtgagtggc
ttcaaggtcacctacactaacacacaggaaggggagcctctctccgcaacggtggactct
ggggattccactctggcactgtcaaagctctctccagggtcctcctatgaggtcagtgtg
atatccgtccttggactggacgagagcgatgcaatcaaagacctggttatgacactccct
gaccctccgagggatctccgggccattaatgtcacagacaccaaggccttgctgctatgg
cgaccagcactggcaacagtcgaccgttacgtcatagtgtatggctctgaaaaagggtca
gatgatgccgagatcactgtatcgggcaatgcggcggagcagcagctgaaaggcctacag
ggctccactatgtacaccgtcacagtcaccagtcagctgggcaacctggacagctctgcc
gccatcactgtcttcaccaccaccggtggatccaggggagacggggaagtccygcgtgac
ctgaaggccagtcaggtgactcctcgctcagcgctgttgacgtggaaagcaccctctgcc
gccgtgggaagctacaagctgacctatcaaacggagggacaggagatgcaggaggttacc
attgactccacagtaacagagttcaaattgatcaggctgcatcccatgtccaagtacacc
gtgcagctacagggggagaggggagggagctatactgcwaaaatttccactgagttcacc
acagggaatctccgataccccttcccaagtgactgttcccaggagctgctaaacgggata
catgagtctggagaggtggagatcttccccaagggaaggcagggaaaaccagtgttggtc
tactgcgaccaggtgactgatggaggcggctggacggttttccagagaaggatggatggg
aaaactgacttcttcagaggctggaaaaactacagcaaaggttttggagaactgagtggg
gaattttggctgggtaatgagaacctacacaatctaaccagcatggcaccaatgacccta
cgtgtggacctccgtgcaggggacgaatcagcgtttgccaagtactctgcattcacagtg
gacactgttagaaggaactatgctctcaaagtgtctgggtacagcggtacagcaggtgac
tctatgagttaccacaacgcgcgcatgttctctaccagagacagagaccccacgcctttc
atcacccgctgtgccatgtcctataaggggggttggtggtacaagaactgccacgaggcc
aaccttaatggcctctacgacaccagtgtcaatcaccagggtgtgatctggactgcctgg
aaaggcaaggacttgtccatccctttcactgagatgaagctccgaccaacatctttcacc
cctccaactcagggataa
DBGET
integrated database retrieval system
