Salvelinus sp. IW2-2015 (Arctic char): 111955161
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Entry
111955161 CDS
T05762
Name
(RefSeq) replication protein A 14 kDa subunit
KO
K10740
replication factor A3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03030
DNA replication
salp03420
Nucleotide excision repair
salp03430
Mismatch repair
salp03440
Homologous recombination
salp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111955161
03420 Nucleotide excision repair
111955161
03430 Mismatch repair
111955161
03440 Homologous recombination
111955161
03460 Fanconi anemia pathway
111955161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
salp03032
]
111955161
03400 DNA repair and recombination proteins [BR:
salp03400
]
111955161
DNA replication proteins [BR:
salp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
111955161
DNA repair and recombination proteins [BR:
salp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
111955161
MMR (mismatch excision repair)
111955161
DSBR (double strand breaks repair)
HR (homologous recombination)
111955161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_3
Motif
Other DBs
NCBI-GeneID:
111955161
NCBI-ProteinID:
XP_023831040
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All DBs
Position
LG30:8819931..8821584
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AA seq
147 aa
AA seq
DB search
MIFPALQPACLIYNRSYKLCTAKSFEMAVFELQKARINSDMLSRYISRPICFVGRVEKIH
PTGKSFSLSDGEGKSASVELNEPLDEELSGVVEVLGMVSNKGTIMASAYNILREDKGIPF
DLELYNDVLKVIHDFPQHYPFEIATSG
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgatatttcccgcgctacaacctgcttgtctgatatacaatcgtagctacaaattgtgc
acagcaaaatctttcgaaatggcagttttcgagttacaaaaagccaggattaactctgat
atgctgtctcgatatatcagcaggccgatttgcttcgttggacgcgttgagaagatccac
ccaacaggaaaatcattcagtctttcggacggagaagggaagtctgcatcagtggaactc
aacgagccccttgatgaggagctgagcggggtggtggaggtgcttggtatggtgtccaac
aaagggacaataatggcctctgcatacaacatactcagagaagacaaaggcattcctttc
gacctggagctgtacaatgatgtcctgaaagtcatccacgatttcccccagcactatcca
tttgaaatagccaccagtggatga
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