Salvelinus sp. IW2-2015 (Arctic char): 111955203
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Entry
111955203 CDS
T05762
Name
(RefSeq) vacuolar protein sorting-associated protein 45
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111955203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111955203
Membrane trafficking [BR:
salp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
111955203
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
111955203
NCBI-ProteinID:
XP_023831116
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All DBs
Position
LG30:complement(16281234..16298132)
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AA seq
569 aa
AA seq
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MNVTLAVKQYISKMIENSGPGMKVLLMDKETTSIVSVVYTQSEILQKEVYLFERIDSQNR
DNMKHLKAICFLRPTKENVENLIQELRRPKYSVYFIYFSNVISKSEIKALAEADEQEVVA
EVQEFYGDFIAVNPHLFSLNLSGVARGRSWEPTLLPRTTQGLTSVLLALKKCPMIRYQLS
SDMAKRLGESVKQIITKEYELFDFRKTEVPPLLLILDRSDDAITPLLNQWTYQAMVHELL
GLNNNRIDLSRVPGISKDLKEVVLSAENDEFYANNLYLNFGEIGTNIKNLMEDFQKKKPK
EQQKLESISDMKAFVDNYPQFKKMSGTVSKHVTVVGELSRLVSERHLMEVSELEQELACQ
NDHSSASQNVRRLLQNPRVSEMDAVRLVMLYALRYERHSSSILPGLMEELNRKGVSERHC
RMVTSMVEYGGKRVRGSDLVNPQDAVAITKQFFKGLKGVENVYTQHAPLLQETLDQLIKG
RLKDSQFPYLGPSSLRDRPQDIIVFVIGGATYEEALAIYNLNRTVPGVRIVLGGTTIHNT
KSFLEEVTLTAGAGQAERLQRAGGQPNRR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgacacttgctgtcaagcagtatatctccaaaatgatagaaaacagcggacca
gggatgaaggttctgctcatggataaagagactaccagcattgtcagtgtggtctacact
caatctgagatcctacagaaggaggtctacctgttcgaaagaatcgactcacagaatcga
gacaacatgaagcacctcaaagccatctgcttcctcaggccaaccaaggagaatgtggaa
aatctgatacaggagctccggcgacccaagtacagtgtctacttcatctacttcagcaac
gtcatcagtaagagtgagataaaagccctggccgaggcggatgaacaggaggtggtcgca
gaagtgcaggagttctatggagacttcattgctgtgaacccacaccttttctccctcaac
ctcagtggtgtggcaaggggtcgtagctgggagccaactctcctgccacgtaccacccag
ggtctgacctcggtgctgctggccctgaagaaatgtcccatgatccgctaccagctgtcc
tcagacatggccaagcgactgggagagagcgtgaagcaaatcatcaccaaggagtatgag
ctgtttgacttcaggaagacagaggtgcctcctctcctgctcatcttggaccgcagcgat
gacgccatcaccccactactcaaccagtggacgtaccaggccatggtgcacgagctgctt
ggcctcaacaacaaccgcattgacctgtccagagtcccagggatcagcaaggacctgaag
gaggtggtgctgtctgcagagaacgatgagttctatgccaataatctgtacctgaacttt
ggagagattggcacaaacatcaagaacctgatggaggactttcagaagaagaagcccaag
gagcaacagaagctggagtccatctctgatatgaaggcgtttgtagacaactacccccag
ttcaaaaagatgtcgggcacagtgtcgaagcacgtgactgtggtgggcgagctgtcccgc
ctggtgagcgagaggcacctgatggaggtgtcagagctggagcaggagctggcctgccag
aatgaccactcaagcgcatcacagaacgtgcgtcggctgctgcagaacccgcgggtgagt
gagatggacgcggtgcgcctggtgatgctgtacgcactgcgctacgagagacacagcagc
agcatcctgccgggcctcatggaggagctcaacaggaagggcgtgtcagagaggcattgc
aggatggtaacgtccatggtggagtatggagggaagagggtgagaggaagtgacctcgtc
aacccccaagatgctgtcgccatcaccaaacagttcttcaaggggctgaagggagttgag
aatgtgtacacgcagcatgcaccgttattgcaggagaccttggaccagctgatcaagggg
cggctgaaggacagtcagttcccctacttaggacccagctcccttagagacaggccacag
gatatcatagtcttcgtcatcggaggggccacctatgaggaggcactggcgatctataac
ctgaaccgcaccgtgcctggggttcggatcgtactgggcggcaccaccatccacaacacc
aagagcttcctggaggaggtgacattgacggcgggtgcaggccaggccgagaggctgcag
agggcgggtggtcaaccaaacagacgctga
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