Salvelinus sp. IW2-2015 (Arctic char): 111955219
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Entry
111955219 CDS
T05762
Name
(RefSeq) partitioning defective 6 homolog gamma-like
KO
K06093
partitioning defective protein 6
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04144
Endocytosis
salp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111955219
09144 Cellular community - eukaryotes
04530 Tight junction
111955219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
salp03036
]
111955219
Chromosome and associated proteins [BR:
salp03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
111955219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
111955219
NCBI-ProteinID:
XP_023831139
LinkDB
All DBs
Position
LG30:complement(13034821..13077663)
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AA seq
453 aa
AA seq
DB search
MNRSFNKSQSSLQYLDCIAVEVKSKYGAEFRRFSVDRFKPGKFEDFYKLIMHVHRISNME
VMIGYADIHGDLLPINNDDNFCKAVSTAHPLLRVFIQRQEEVDYSSYGTHSLTRKKKAVV
ALRNDVNRKRPHIRIGMPQDFRPVSSIIDVDILPESHRRVRLYRHGSDKPLGFYIRDGTS
VRVTPHGLEKVPGIFISRMVPGGLAESTGLLAINDQVLEVNGIEVMGKVLDQVTDMMIAN
SHNLIITVKPVNQRNNVVRASRISGSSGQSSDSSGSTGYPSLSTTAMATGAHGYADELES
DEESDIVIESSLKRPSRRSNTSVVSVASTSRSHTQAPPPAPVEHPSPPTRPLSVVSTASF
HSQPSFHSQPSLNGLSHHGSLSYMLHRDLNLQHPQYQPHTLQHHHSQHHSSNPALRESNG
SLHKILSTMRTDPRHSLALPRGGVEEDGTVITL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggagttttaataaatcccagtcttccctgcaatacttggactgcatcgcggtt
gaagtgaaaagcaagtacggagcagagttccggaggttctccgtggaccgtttcaaaccg
gggaagttcgaggacttctataagctcatcatgcacgttcaccgcatctccaacatggag
gtcatgattggctacgctgacatccacggagacctgctgccaatcaacaacgacgacaac
ttctgtaaggcggtgtctacggcccacccactgctccgggtcttcatacagagacaagag
gaggtcgactacagcagctacgggacccactctctgacccggaagaagaaggctgtggtg
gcgctgaggaacgacgtcaacaggaagcgacctcacatccgcatcggaatgccgcaggac
ttccggccagtctcctccatcatcgatgtggacatcttgccggagtcccaccgccgcgtt
cgtctctaccgtcacggctccgacaaacccctggggttctacatccgggacgggaccagc
gtacgggtgacaccacatggcctggagaaggttcctgggatcttcatctcccgcatggta
cctggcggcctggctgagagcacagggctgctggccatcaacgaccaggtgcttgaggtg
aatgggattgaggtgatgggcaaggtgttagaccaggtgacagacatgatgatcgcaaac
agtcacaatcttatcatcacggtgaagccggtgaaccagcggaacaacgtggtgcgagcc
agccggatctccggcagctccggtcagtcgtcagacagcagcggttccaccggctacccc
agcctgtccaccacagccatggcgaccggtgcccacggctacgccgacgagctggagagc
gacgaggagtcagacatcgtcatcgagagcagcctcaagcggccgtcgcggcgctccaac
acatcagtggtgtctgtggcatcaacatcacgctcccacacccaagcccctcccccagca
cccgtggaacaccccagcccccctacccgaccgctctctgtggtttccaccgcctccttc
cactcccaaccctccttccactcccagcccagcctcaacggcctctcccaccacggcagc
ctcagctatatgctgcacagggacctgaacctacagcacccacagtaccagccccacacc
ctccagcaccaccattcccagcaccacagcagcaacccagccctccgggagagcaacggc
agcctccacaaaatcctcagcaccatgaggacggaccctcgacacagcctggccctgccc
cggggaggggtggaagaggatggcaccgtcatcaccctataa
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