Salvelinus sp. IW2-2015 (Arctic char): 111955331
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Entry
111955331 CDS
T05762
Name
(RefSeq) claudin-4-like
KO
K06087
claudin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03272
Virion - Hepatitis viruses
salp04382
Cornified envelope formation
salp04514
Cell adhesion molecules
salp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
111955331
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111955331
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
111955331
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111955331
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
salp03037
]
111955331
04147 Exosome [BR:
salp04147
]
111955331
04515 Cell adhesion molecules [BR:
salp04515
]
111955331
Cilium and associated proteins [BR:
salp03037
]
Other cilia and associated proteins
Stereociliary proteins
111955331
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
111955331
Exosomal proteins of colorectal cancer cells
111955331
Cell adhesion molecules [BR:
salp04515
]
Immunoglobulin superfamily
L1 family
111955331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
111955331
NCBI-ProteinID:
XP_023831305
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Position
LG30:20516429..20518966
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AA seq
232 aa
AA seq
DB search
MVNTGMQLISFTCAVTGWVMAIAVTALPQWKVSAFIGSNILTSEIKWEGIWMSCIYQTTG
HMQCKTYDSMLALPPDLQAARALMCVAIFLGWLSCTVSCCGMKCTTCAGDDRHAKAGIAL
SGGVLFILTGLCVLVPVSWTANTVVQDFYNPNVPVMYKRELGQAIYLGWASAVILIISGA
VLSSTCPHIERGGGEYHQGYMGRSFPNLRPSPLAPDPPKPITSNSVPLKEYV
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacacaggcatgcagctgatcagcttcacctgcgcggtgacaggttgggtcatg
gccatcgctgtgacggccttgcctcagtggaaggtgtccgccttcatcggcagcaacatc
ctcacctccgagatcaagtgggagggcatctggatgagctgcatctaccagaccacgggc
cacatgcagtgcaagacctacgactccatgctggctctgcccccggacctccaggcagct
cgtgccctcatgtgtgtggccatcttcctgggctggctgtcctgtaccgtgtcctgctgc
ggcatgaagtgcaccacgtgcgctggggacgaccgccacgccaaggcgggcatcgccctc
tccggcggcgtgctattcatcctgacgggcctgtgcgtgctggtgcctgtctcctggacc
gccaacacggtggtccaggacttctacaaccccaacgtgcctgtcatgtacaagcgagag
ctgggccaggcgatctacctgggttgggcatctgcagttattctgataatcagcggggcc
gtgctgagcagcacctgcccccatatcgagaggggaggaggggagtaccaccagggatac
atgggccggagctttcctaacttgcgcccctcccccctcgcacctgatcctccgaaacct
atcacctctaacagcgtgcccctgaaagaatatgtgtag
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