Salvelinus sp. IW2-2015 (Arctic char): 111955368
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Entry
111955368 CDS
T05762
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00512
Mucin type O-glycan biosynthesis
salp00514
Other types of O-glycan biosynthesis
salp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
111955368
00514 Other types of O-glycan biosynthesis
111955368
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
salp01003
]
111955368
Enzymes [BR:
salp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
111955368
Glycosyltransferases [BR:
salp01003
]
Glycan extension
Type 3 chain
111955368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Glyco_transf_25
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
111955368
NCBI-ProteinID:
XP_023831358
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All DBs
Position
LG30:complement(8855133..8861061)
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AA seq
336 aa
AA seq
DB search
MITLSLVPFVSGLCIGFLSIQYLVYSDTSTAKRAVFSLGYSSGVHYDKRVPRHIHSDEDR
SVAANLSQNVRLLCWIMTGPKNLESRTKHIRATWGKRCNKILYMSSVETEFPTVGLNVTE
GRDQLYWKTIRAFQYIYQHHRNDYDWVLKADDDTFVVVENLRHTLSKQDPYKPVYFGRRF
RPFVQQGYMSGGAGYVLSKEAVRRFIKGFDTGKCSHFSTIEDMALGKCMEMMGVEPGDSR
DVKGRQTFHPYPPDMYLIKEPPRKLPSHLLYDHYKPREGPECCSDHIVSFHYIYPVEMYT
LEYFTYHLRPYGYKYRYNPDAXAAEIESNTTTPVSA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatcactctttcacttgtaccctttgtgtctgggctgtgtataggatttctgtctatt
caatacttagtttactcagacaccagcactgcaaaacgagctgttttctcactgggttac
tccagtggagttcattatgacaaaagggttccaagacacatacactcagatgaggacagg
agtgttgcagccaacctgtcccaaaatgtacgactactatgttggatcatgactgggcct
aagaacctggagtccagaaccaaacacatccgggccacctggggcaaacgatgcaacaaa
atcctctacatgagctcagtggagacagaattccccacagtggggctcaacgtaactgag
ggacgagaccagctctactggaagaccatcagagccttccagtacatctaccaacaccac
cgcaacgactacgactgggtcctcaaagccgatgatgacacgttcgtggtcgtcgagaac
ctccgacacacattgtctaaacaggacccgtataagcctgtatactttgggcgaaggttc
cgcccgttcgtccagcagggttacatgagtggtggagccggctatgtcctcagtaaagaa
gccgtcagaaggttcatcaagggattcgacacggggaaatgttcccacttctccaccata
gaagacatggctctggggaagtgtatggagatgatgggtgtggagccgggggactccaga
gatgtgaagggaaggcagacgtttcatccctacccaccagacatgtacctgatcaaagag
ccacccagaaaactgccctcgcatctcttatacgaccactacaaaccaagagagggccca
gaatgttgttcagatcacatcgtatcatttcactacatctaccctgtagagatgtacacg
ctggaatacttcacctatcatctacggccctatggatacaagtacaggtacaaccctgat
gctscagcagctgaaattgagagtaacaccaccacacctgtctctgcttaa
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