Salvelinus sp. IW2-2015 (Arctic char): 111955483
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Entry
111955483 CDS
T05762
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin-like
KO
K06252
tenascin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04510
Focal adhesion
salp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111955483
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111955483
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
salp00536
]
111955483
Glycosaminoglycan binding proteins [BR:
salp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111955483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
EGF_2
EGF_Tenascin
hEGF
Pur_ac_phosph_N
EGF
Big_5
Nop14
CDC45
Motif
Other DBs
NCBI-GeneID:
111955483
NCBI-ProteinID:
XP_023831476
LinkDB
All DBs
Position
LG31:10196499..10229408
Genome browser
AA seq
2069 aa
AA seq
DB search
MPLFPSFLLLLLACPALLTPSGSQSLQTGGQRAPRNTKPEGGGQPIKVVISEACVQGDSS
QNQGKELDLEPGSSLVLTHRIRLVPGSCGGGCEAEFAALRDRLERLEKEVSALREKCGGP
EGGCCTSQQSKGAECSMQPEGDECPNECSDQGRCEDGKCVCFPGFSGPDCSLSDCPGNCN
DKGKCVNGQCVCDPGFTGPDCSSESCPGNCNNKGQCVNGKCVCNTGLIGPDCSTKACPGN
CNNKGRCENGQCVCNTGLTGPDCSTKACPGNCNNGGRCENGQCVCNTGLTGPDCSTKACP
GNCNNKGQCVNGKCVCNTGFTGPDCSTKACLGNCKNRGKCVNGKCVCDSGFTGPDCSTKS
CPGNCSNRGKCVNGQCVCDMGFTGPDCSAKACPNNCSNKGRCVNGKCVCEVGFTGQDCAA
KGCPDNCSXKGRCVKGRCVCRRGFTAPDCSQCESGFTGVDCGTVMSGVSQLNTKDVTESX
VTLFWTPPPVQYDTYHVTFASQKEGDQQITSQVGGKLTTYTQTGLAAGQEYTVTIKGEIN
RRMSTESTAEFTTLISGPTHLRVVKTTTTSAVVQWEQSQGDIDRYRLTVTPNQTDGTAKG
RQDLTLPPERDSAQIDGLDPGHLYDITLVAEKGGIKSKPTTVQVTPGKSTKTISSVTMPV
APGGESHEGDSAGNTKPVKDIFYTKAKGEEPERVKDWSGPGSVTVEGTNGTKEDTSVRTS
TRPLVNTNYRVIPKTGDRITLPRKPYIGGSIHFNGTRVGQGGRRVGHSLLKKPTSRNPLE
RPKVKKTLDTDSKPENPFVGDKTIALTVKETNLETSPLGEKDETLTKTYPVGILPVNATP
SSGSEQTVIPGLKDLPERKKDTETETNEPGPGTEGLEHTTTSEKNTTVHPNGKKCVNKVK
LTHRKVNVTRRERVIGGRVNGTIVKSKPTAEQGLAEKEDSALKVSETGHSKTTFHERNLV
IHTQSKADDISPHTTQSPTYPTSSSPVSPTSYMSLSSSAPAKHDESMTGMGQPMTDRDVV
NAKTLLVPQSQSSNLPPEREPTSSSESEQNDKGPSPSNPEDSYSGKDHVAVAEEGVSKDG
EKTADVGLFGTKQNRTKTLRVGGSPPFRRLPPKGPYQRRPNLNMRPFQNRTRSPFSAPTK
QNESKTGTGQPMTDRQLVFPKTVTVSPAQSSTLPPDAQPERAPKSSSESEHSGKGYSSSS
STSEESDFTKENVAVAEDGISRDGDRATDVVSSGTERNRSKTLTLGNTPPLRRLPPKGTQ
QRRPHPNMGAFPNRXRTHLIPPHHPSRGPIRRPFPPKLTNRDNGIIIQTSQPGEQGTYST
SQNDTNTDLKPKTLLRKINATAGKIARXQTYIRNNSSLGQRGQDFKTGHSDQGSQVSKNA
DSRDSPNQINGSDVTTTGKTGQPLNSVGVQSITSGGFILVWEAPEGMYRNFIVTREEHGS
KNEAEKEEEKEEEEEESESEEDRQEEGEAEGQTEKENKGNEEESEMGVSQGKEGVEENTV
INSKSDNQRQSSDRNATAKVGDGGTIKFFKVLPGSARSFPFQNLHPQTRYSLSVFGKGPG
LHSKIHRLIVSTGPEPPSGLLFSEVTETSFSVSWTKPKSPVSGFKVTYTHTQEGEPISVM
VDSGDSTLALSKLSPGSSYEVSVISVLGLDESDAIKDLVMTLPDPPTDLQAINVTDTKAL
LLWRPALATVDRYVIVYGSEKGSDDVKITVSGNAAEQQLKDLQGSTMYTVTVTSQLGNLD
GAPAITVFTTTSGSGGDGEGPRDLKASQVTPXSXLLTWKPPSAAVGSYKLTYQTEGQEMQ
EVTIDATVTEFKLTRLHPMSKYTVQLQGERGGSYTAAISTEXTTGNLRYPFPSDCSQELL
NGMHESGEVEIFPKGRQGKPVLVYCDQVTDGGGWTVFQRRMDGKTDFFRDWKNYSKGFGE
LSGEFWLGNENLHNLTSMAPMTLRVDLRAGDESVFAKYSTFTVDTVRRNYALKVSGYSGT
AGDSMSYHNGRMFSTRDRDPAPFITRCAMSYRGGWWYKNCHQANLNGLYDTNVNHQGLIW
TAWKGKDYSVPFTEMKLRPTSFTPPTQGY
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttttcccatccttcctcctcctgctcctcgcctgccctgccctcctgacccca
tcaggttcccagagcctgcagactgggggtcaaagggcacccaggaacacaaagccagag
ggtggcgggcagccaatcaaagtggtgatctctgaggcatgtgttcagggggactccagt
cagaaccagggaaaggaactggaccttgagcctggttcctctctagtccttacccatcgg
atccgactggttccggggtcgtgcggaggcgggtgcgaagccgagtttgctgccctgcga
gaccgtctggagaggctggagaaggaggtgtctgccctgagggagaagtgtggaggccca
gaggggggctgctgcacgtcccagcagagcaaaggcgctgagtgctccatgcagccggag
ggagacgagtgtcctaacgagtgcagtgaccagggacgctgtgaggacggcaagtgtgtc
tgcttcccagggttcagtgggccagactgcagtttgtctgactgccccgggaactgcaat
gacaaggggaagtgtgtgaacggccagtgtgtgtgcgacccaggtttcacagggccagac
tgctcttcagagtcctgccctggtaactgtaacaataaggggcaatgtgtgaatggcaag
tgtgtgtgcaacactggcctcatagggcccgactgctccaccaaggcatgccctggtaac
tgtaacaataaggggcgatgtgagaacggccagtgtgtgtgcaacactggcctcacaggc
cctgactgctccaccaaggcatgtcctggtaactgtaacaatggggggcgatgtgagaac
ggccagtgtgtgtgcaacactggcctcacaggccctgactgctccaccaaggcatgccct
ggtaactgtaacaataaggggcaatgtgtgaatggcaagtgtgtgtgcaacactggcttc
acaggtcctgactgctccaccaaggcatgtcttggaaactgcaaaaacagggggaagtgt
gtgaatggcaagtgtgtgtgtgatagcggttttacagggccagactgttctaccaagtcc
tgccctggcaactgcagcaaccgtggaaagtgtgtgaacggccagtgtgtctgcgatatg
ggctttacggggccggactgttccgccaaagcatgtcccaataactgcagcaacaaggga
aggtgcgtgaacgggaagtgcgtgtgtgaagtgggcttcactgggcaggactgcgccgct
aagggctgtcccgataactgcagcaakaaagggcgctgtgtgaaggggaggtgtgtgtgt
cgccgtggtttcaccgccccggactgcagccagtgtgaatctgggttcactggagttgac
tgtggcaccgtcatgtctggtgtgtcccagctcaacaccaaggacgtcactgaatccntt
gtcaccctcttctggaccccacctccagtccagtatgacacctaccacgtcaccttcgcc
agccagaaagagggcgatcaacagataacatctcaagttggagggaagctcacgacctac
acccaaacaggactggcggccgggcaggagtacaccgtgacaatcaagggagaaataaat
aggagaatgagcactgagagcacagcagaattcacaacccttatctctggacccacacac
cttcgagttgtgaagacaaccacaacatctgcagttgtccaatgggaacaatcacaaggc
gacatcgacaggtatcgcttaactgttacacccaatcagacagacggaacagccaaggga
agacaagacctgaccctgccccctgagagggactcggcccagattgacggtttggacccg
ggacatttgtatgacatcacattagtggctgaaaaaggcgggatcaagagcaagccaaca
acagtccaagtcactcctggaaaatccacaaagacaatatccagtgtgaccatgccggta
gcaccaggaggagaaagccatgagggagactcagcagggaatacaaagcctgtgaaggac
atcttctacacgaaggccaagggtgaagaaccagagagggtgaaggattggagtggacca
ggctctgtaacagtcgaaggcaccaatggaaccaaagaggacacatctgttagaaccagt
acaagaccacttgtcaacacaaactacagggttatacctaaaacaggtgatagaataacc
ttgcccaggaaaccatacattggaggctctatccattttaatggtacaagagtcggccag
ggtgggaggagagtgggtcacagtcttctcaaaaagcctacaagcagaaatccattggag
cggccaaaggtcaagaagaccttggatactgactctaaaccagaaaatccctttgttggg
gacaagactatagccttaactgtgaaagaaactaacctggagacaagtcctcttggagaa
aaagatgaaactttgacaaagacatatcctgttggaatccttcctgtaaatgccactcca
agctctggttctgaacaaacagtgattcctggcttaaaggacctacccgaaagaaaaaaa
gatacagagactgaaacaaatgagccagggccagggacagagggtttggagcataccacc
acatcagaaaaaaatactacggttcacccgaatgggaagaaatgtgtcaacaaggttaaa
ttgacacacaggaaagtcaatgtgacacgtagagagagagtcattggagggagggtgaat
ggcacaatagttaaaagtaaacccacagcagagcagggtttagctgaaaaagaggacagt
gccctaaaagtgtctgaaacaggacattcaaagacaacatttcatgagcgtaacctggta
attcacacacagagtaaagcagatgacatttctccacacaccacacaaagtcctacatat
ccaacttcctcttcaccagtatcacctacttcctacatgtcactttcttcttcagctccc
gcaaaacatgatgaatcaatgaccggtatgggtcaacctatgactgacagagacgtggtg
aatgcaaagactttgcttgttccccaatcccaatcatccaacctccctccagagagggag
ccaacatcctccagtgaatcagaacagaatgataaaggaccatctccctccaaccctgag
gactcatactcaggtaaagatcatgttgcagtagcagaagagggagtcagcaaagatgga
gagaaaaccgctgacgtgggattgtttggaaccaaacaaaacaggacaaagactctgaga
gtgggcggctcaccaccttttcgccgcctacctccaaaggggccctaccaacgccgcccg
aacctaaatatgagaccattccaaaacaggacacgttcacctttttcagctcccacaaaa
caaaatgaatcaaagaccggtacgggtcaacccatgactgacagacaactagtgtttcca
aagacagtaacggtttccccagcacaatcctcaaccctccctccagatgctcagccagag
agagcaccaaagtcctccagtgaatcagaacacagtggcaaaggctattcatcatcatca
tccacttcagaggaatcagactttactaaagaaaatgttgctgtggcagaggatggtatc
agcagagatggggacagggcaactgacgtggtgtcgtctggaactgaacgaaacaggtca
aagactctgacactgggcaacacaccacccttacgccgtctacctccaaaggggacccag
caacgccgtccacacccaaatatgggggcattcccaaacaggycacgaacacacctgata
ccccctcaccatccatcaagaggccccatacgcagacctttcccacctaaactgacaaac
agggacaacggcatcatcattcaaacctctcaaccaggggagcagggcacctacagcacc
agccagaatgacacaaacacagaccttaagcccaaaactctcctcaggaaaataaatgcc
acagctggtaaaatagcacgamatcaaacatacataagaaataacagtagcttgggccaa
aggggccaagattttaaaacaggccattctgaccaaggtagccaagtgagtaagaatgct
gactcaagagacagcccaaaccagataaatgggtcagatgtcactactactggaaaaaca
ggccagcctctaaactcagtgggggttcaaagcataacctcaggagggttcatactcgtt
tgggaagcaccagaggggatgtacagaaatttcatagtaacccgggaagagcatggaagt
aagaatgaggcagagaaagaggaggagaaggaagaggaagaggaggagagtgagtcagag
gaggataggcaggaagaaggggaggcggagggacaaactgagaaggagaacaaggggaat
gaggaggaaagtgaaatgggggtgagtcaaggtaaggagggcgtggaggagaacactgtt
atcaatagcaaaagtgataaccaaagacagagcagcgaccgtaatgctacggctaaagtt
ggtgacggtggtacaatcaagttcttcaaagtccttccggggtcagctcgctcattccca
ttccagaatctccatccacagacccgctattccttgtctgtgtttgggaagggtcccgga
ctacactccaaaattcacagactcatcgtcagcacaggcccagagcctccctcaggtctt
ctcttcagtgaagtgactgagacgtctttctctgtgtcctggaccaagccaaaaagtcca
gtgagtggcttcaaggtcacctacactcacacacaggaaggggagccgatctccgtaatg
gtggactctggggattccactctggcactgtcaaagctctctccggggtcctcctatgag
gtcagtgtgatatctgtccttggactggacgagagcgatgcaatcaaagacctggttatg
acactccctgaccctccaacggatctccaggccattaatgtcacagacaccaaggccttg
ctgctatggcgaccagcactggcaacggttgaccgttacgtcatagtttatggctctgaa
aaaggttcagatgatgtgaagatcactgtgtcgggcaacgcggccgagcagcagctgaag
gacctgcagggctccactatgtacacrgtcacggtcaccagtcagttgggcaacctggac
ggcgctcccgccatcaccgtcttcaccaccaccagtggatctgggggagacggggaaggc
ccgcgtgacctgaaggccagtcaggtgactcctcyctcagrgttgctgacgtggaaacca
ccctctgccgctgtgggaagctacaagctgacctatcagacggagggacaggagatgcag
gaggttaccattgacgccacagtaacggagttcaagttgaccaggctgcatcctatgtcc
aagtacaccgtgcagctacagggagagaggggagggagctatactgctgcaatttccact
gagwtcaccacagggaatctccggtaccccttcccaagtgactgttcccaggagctgctg
aacgggatgcatgagtctggagaggtggagatcttcccaaagggaaggcagggaaaacca
gtgttggtctactgcgaccaggtgactgatggaggcggctggacggtcttccagagaagg
atggatgggaaaacggacttcttccgagattggaagaactacagcaaaggatttggagaa
ctgagtggggaattttggctgggtaatgagaacctacacaatctaaccagcatggcaccg
atgaccctacgtgtggacctccgtgcaggggacgaatccgtgtttgccaagtactccaca
ttcacggtggacactgttaggaggaactacgctctcaaagtgtctgggtacagcggtaca
gcaggtgactctatgagttaccacaacgggcgcatgttctctaccagagacagagacccc
gcgcctttcatcacccgctgcgccatgtcctatagggggggttggtggtataagaactgc
caccaggccaaccttaatggcctctacgacaccaatgtcaatcaccagggtttgatctgg
actgcctggaaaggcaaggattattccgtccctttcactgagatgaagctcagaccaaca
tctttcacccctccaactcaggggtactga
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integrated database retrieval system
