Salvelinus sp. IW2-2015 (Arctic char): 111955588
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Entry
111955588 CDS
T05762
Symbol
gdf6
Name
(RefSeq) LOW QUALITY PROTEIN: growth/differentiation factor 6
KO
K20012
growth differentiation factor 6
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04060
Cytokine-cytokine receptor interaction
salp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111955588 (gdf6)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
111955588 (gdf6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
salp04052
]
111955588 (gdf6)
Cytokines and neuropeptides [BR:
salp04052
]
Cytokines
Transforming growth factors (RSTK binding)
111955588 (gdf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
111955588
NCBI-ProteinID:
XP_023831563
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Position
LG31:complement(4067799..4072628)
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AA seq
412 aa
AA seq
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MDFYQITTFYAVLTCVWDLPCFQSFTIFLPSASKSSKVTKVFDGREAKYFKDIYSSSNER
YYKGGLKDPVEPHDYMLSIYKTFSTAEKLGLNASFFRSSKAANTIASFVDIGQDDLPLSP
LRRQQYLFDVSTLSDRAEVLGAELRIYTKVSGNFRMSEMEPVDIQLLSCRSQQLLDSRTL
DLQESHRPRWEVLDVWEIFKDRDHLTHGRQFCLEVKAMLDNPERELDLHHLGFHRNGRSQ
QKKAILVVFTRSKKRQTLFSERREGRTLIGPGEKGKERGPRSNSKASRRRRTAILKNRHG
KRHGKKSKSRCSKRPLHVNFRELGWDDWIIAPLDYEAYHCEGVCDFPLRSHLEPTNHAII
QTLMNSMNPSNMPPSCCAPSKLSPISILXIDSGNNVVYKQYEDMVVESCGCR
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggatttctatcaaataaccacattttacgcggtcctcacatgtgtatgggatttacca
tgttttcaatcatttactattttccttccgtctgcctcaaagagcagcaaggtcacgaaa
gtatttgatggacgagaggcaaaatatttcaaagatatctactcatcatcaaatgagcgg
tattacaagggtgggctcaaagatccagttgaaccacacgactacatgctttcaatttat
aagactttctctacagccgaaaaattggggctaaacgcaagtttctttcggtcgtcaaaa
gcagctaacactatagcaagttttgtggacatcggacaagatgacctcccactctcccct
ttgcgacgacagcagtatctgtttgacgtctcaaccctctcagacagagctgaggtgctg
ggggctgagctgaggatatacaccaaagtgtctgggaatttcaggatgtcggaaatggag
ccagtggacattcagctactctcctgccgctctcagcagctgctggactccagaacgttg
gatcttcaggagtcccatcggcccagatgggaggtgttggacgtgtgggaaatatttaag
gacagggatcacctcacacacgggagacagttctgtctggaggtcaaggccatgctggac
aaccccgagagggagcttgacttgcatcatctgggctttcacagaaatggtcgctcacaa
caaaagaaggccattttagttgtgttcaccaggtccaagaagagacagacccttttcagt
gaaaggagagaaggaaggacattgattggccctggggaaaaggggaaagagaggggccct
cgttctaattccaaagccagccggagacgcaggacggcgatattgaagaatcgccacggg
aagaggcatggcaaaaagtcaaaatcgagatgcagcaagaggccgttgcatgtgaacttc
agagagctgggctgggacgattggatcatcgctcctctggattacgaggcytaccactgt
gagggcgtgtgtgactttcctctgaggtcacatctagagcccacaaaccatgccatcata
cagacccttatgaattcgatgaaccccagcaacatgcctcctagctgctgtgccccgtcc
aaactcagccctatcagtattctctaratcgactcaggaaataatgtggtgtataagcag
tatgaggatatggtggttgagtcgtgtggttgtaggtaa
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