Salvelinus sp. IW2-2015 (Arctic char): 111955708
Help
Entry
111955708 CDS
T05762
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
salp04990
]
111955708 (snx13)
Domain-containing proteins not elsewhere classified [BR:
salp04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
111955708 (snx13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
111955708
NCBI-ProteinID:
XP_023831752
LinkDB
All DBs
Position
LG31:complement(21369074..21400632)
Genome browser
AA seq
991 aa
AA seq
DB search
MSNDVANRRISSAQLIQASLSVWGWGGLGVVLFLITFGPFAIFYLAFYICCVVGGGFAVT
LLFGKTNSERHLEKCEHSYLPATQTGILKTLDEMRLEQKPIKIDRRLTGSNYIDEPLQQV
IQFALRDYIQYWYYTLSEDESFLLEIRQTVQNALVQFSTRSKEVDWQPYFTTRLVDDFAT
HLRVFRKAQDRLERRDDNKQRDLSEEMVESFFEAEVEMERNVCRDVVCTSLKDEEGFLRD
LCEVLLYLLLPPGDFHNKNMRYFLREILARGVLLPLVNQLSDPDYINQFVIWMIRDSSCN
YEAFMNILKLTDKVSELEAVKDKALEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCET
RIQRLQSGKEVDTLKLAANFGKLCIIPLEHILVHNIALQFFMDYMQAAGAQAELFFWLTV
EGYRVTAQQQLEVMEGWQKDGKKGGSTKGLLKAAALGVYEQYLSDKASPRVQVDEVSVVK
LREKLQKEGDPTPEIFDDIQRKVYDMMLRDERYYPSFRQSPLYIRMLAELDMLKEPSYRG
SDDGDGESFNGSPTGSINLSLDDLSNSCHDENIQLHAFISDTVADACLPGAGLGMGLGLL
GATGVCNDHGKTYALYAITVCRRNHDGSEDSWKTYRRYSDFHDFHMRITEQVKFENLTSI
LKLPGKKTFNNMDRDFLEKRKKDLNAYLQLLLNPEMVKACPTLVPYVYDFLENKQYSKGK
GDFARKMDTFVNPLRSSMRNVSNAVKRLPDSLAEGMNTAADNMGRMSEKLGQDIKQSMFK
VPPLLPKSDVDPEHCRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQ
QLIRATYGDTINRKIVDHVDFMTAPEQVADYVKKFRDSYWPNGILAESPPRRDKNIRMRT
RVAAKTNLLGIMPDELKHIIGADTTRKGILRVFDMFQHGPMNRRLVYVLLEGFLETMFPQ
YKFPELFVKLHSRSPRTARYTQKLKSTSLKR
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgacgttgctaacaggagaatctcttcagctcaactgattcaggccagtctg
tctgtgtggggatgggggggtctaggagtggtgctgttcctcatcactttcggacccttc
gctatcttctacctggccttctatatctgctgcgttgtaggcggtggttttgcggtcact
ctgttgtttgggaagactaactcagagagacatctagagaagtgtgaacactcctacctg
ccagccacacaaacgggtatactgaagacgttggatgagatgaggttggagcagaagcct
ataaagatagacaggagactgactggctccaactacatagacgagcctctgcaacaggtc
atccagtttgcattgagagattatattcagtattggtattacactctgagtgaggatgag
tctttcctgctggaaatcagacagactgtccagaacgctctggtccagttctctacacgg
tctaaagaggtggactggcagccttatttcaccaccagactcgtggatgacttcgctact
cacctccgagtcttcagaaaggcccaggacagactggagcgcagggatgacaataaacag
agggacttgtcggaggagatggtggagtcattctttgaggcggaggtagagatggagagg
aacgtctgcagagacgtggtctgcacctccctgaaggatgaagaagggttcctgagggac
ttgtgtgaggtgctgctctaccttttactacctcctggagacttccacaacaagaacatg
agatacttccttagggagattctggcgcgaggtgttctccttcccctggtcaaccagctg
agtgatcctgattacatcaaccagtttgttatctggatgattcgggactctagctgtaac
tacgaggcatttatgaacatcttgaagctgacagacaaagtgtctgagctggaggctgtt
aaagacaaggctctggaggaactacagtacctacgatcactggacaccgcaggagacgat
atcaatgttataaagaatcagatcaacagtctgttgtttgtgaagaaggtctgtgagacc
aggatacagaggctacagtcagggaaggaagtggatactctaaaactagcagctaatttc
ggcaagctgtgcatcataccgctggaacacatccttgttcacaacatcgccttgcaattc
tttatggactacatgcaggcggctggggcacaggcagagctgttcttctggctgacagtg
gagggctacagagtaacagcccagcaacaactagaggtgatggagggatggcagaaggat
ggaaagaagggaggttccactaaaggactgctgaaggctgcagcactaggggtctatgaa
cagtacctgtctgataaggcgtcccccagggtgcaggtagatgaggtgtctgtagtcaaa
ctgagagagaagctacagaaggaaggagaccccacgccagagatattcgacgacatccag
agaaaagtgtatgacatgatgcttcgtgatgagaggtactacccgtcgttcagacagagt
cccctctacatcaggatgttagctgaactggacatgctcaaagaaccgtcttatagagga
tcagatgacggagatggagaatcgttcaacggttctccaacaggaagcattaatctatct
ctggatgacctttcgaattcctgccatgacgaaaatatccagctacacgccttcatctct
gacacagtagctgatgcttgtctccccggggctgggttgggtatggggttggggctgctg
ggtgctacaggggtgtgtaatgaccacggcaagacctacgccctctacgccatcaccgtg
tgccgccgtaaccacgacggcagcgaggactcctggaaaacctaccgacgctactctgac
ttccacgacttccacatgaggatcacggagcaggtaaagtttgagaacttgacgtcgatc
ctgaagctgccagggaagaagacgttcaacaacatggacagagacttcctggagaagagg
aaaaaagatcttaacgcatacctacagctgctgctgaatccagagatggtgaaggcctgt
cctactctggtcccctatgtctatgacttcctggagaataagcaatacagcaagggcaag
ggagacttcgcacgcaagatggatacgtttgtgaaccctctgcgtagctcgatgcgtaac
gtgtccaacgcagtgaagagactgccagatagtctggctgaagggatgaacactgctgct
gacaacatgggacgcatgtcagagaaactgggacaggacatcaaacagtccatgttcaag
gtgcctccactgctccccaagtctgacgttgacccagagcactgccgagtctcagcccag
ctggacgacaacgtggatgataacatccccctgcgtgtgatgctgctgctgatggatgag
gtgtttgacctgaaggagaggaaccagtggcttcgcaggaacatcaagaaccttctgcag
caactcatcagagccacatacggcgacactatcaacaggaagattgttgatcatgtggac
ttcatgacagctccagaacaggtggcagactacgtcaagaagttcagggattcatactgg
cccaacggaatcctagcagagtctccgccccgccgggacaagaacatccgcatgaggaca
cgggtcgccgccaagaccaacctattgggaatcatgccagatgagttgaagcacatcata
ggggcggatacgactcgtaaaggcatcctgcgtgtgtttgacatgttccaacatggacca
atgaatcgacggctggtctacgtgctgctagaaggtttcctggagaccatgttccctcag
tacaagttcccagagctgtttgtcaaactgcactcccgttcgccgcgcacagccagatac
acacagaaactcaagagcacctccctgaagaggtga
DBGET
integrated database retrieval system