Salvelinus sp. IW2-2015 (Arctic char): 111955727
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Entry
111955727 CDS
T05762
Symbol
tra2a
Name
(RefSeq) transformer-2 protein homolog alpha
KO
K12897
transformer-2 protein
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111955727 (tra2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
salp01009
]
111955727 (tra2a)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
111955727 (tra2a)
Protein phosphatases and associated proteins [BR:
salp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111955727 (tra2a)
Spliceosome [BR:
salp03041
]
Common components
Common spliceosomal components
SR proteins
111955727 (tra2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FMP27-BLTP2_C
Spem1
Motif
Other DBs
NCBI-GeneID:
111955727
NCBI-ProteinID:
XP_023831792
LinkDB
All DBs
Position
LG31:25154638..25160916
Genome browser
AA seq
319 aa
AA seq
DB search
MSDIEDGNFDGRGSRSPSKSDRGSPVRVKSESRSGSASPSRAAKHSESRSRSKSRSHSRR
HSNRRYSRSRSPSNRKKSRSYSPEYRKKKSQSESPNRRHTSSRSHDFRKETFGQGAGGDE
DARANPDPNQCLGVFGLSLYTTEKDLREVFGRYGPLAGVNVVYDQRTGRSRGFAFVYFKR
IDDSKEAMERANGMELDGRRIRVDFSITKRAHTPTPGIYMGRPTHNDGGGGGGGGGERNS
GSSGGGRRGRDSYDRYDDRRGGGYDRGYDRGYDRGDRGGDRGYDRYDEYDKYSRRRSPSP
YYSRYRSRSRSRSYSPRRY
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacattgaggatggaaacttcgatggacgaggctctcgctccccatccaaatcg
gaccgtggcagtcctgtccgggtcaagtcagagagcagatccggctccgcaagcccatcc
agggccgccaaacactcagagtctcggtcccgctctaagtccaggtctcactctcggagg
cactccaaccgcaggtacagccgctctcgctccccctccaaccggaagaagtcccgttcc
tacagcccggaataccggaagaagaagagccagagcgagtcacctaaccgccgccatacc
agcagcagaagccatgacttcagaaaagagacattcggtcagggagcaggaggtgatgag
gatgccagggcgaaccctgaccccaaccagtgcctgggggtgttcgggctgagcctgtac
accacggagaaggacctgagggaagtgtttggccggtatggcccgctggccggggttaac
gtggtgtatgaccagcgcaccgggcgctcccgcggctttgcatttgtctacttcaagagg
attgacgactccaaggaggcgatggagcgtgccaacggtatggagctggacgggagacgt
atcagagtggacttttccatcaccaagagggcccacacccctacgcctggcatctacatg
ggccgacccacacataatgatggtggtggtggaggtggaggtggaggagagcgaaacagt
ggcagcagtggtggagggaggaggggtcgggactcgtacgaccgatacgacgatcgacgg
ggcggcggctacgaccgtggatatgaccgtggatacgatcggggagaccgaggtggagac
cggggatatgacagatatgacgagtacgacaagtacagtcgcaggcgctctccctctccc
tactacagtcgatacaggtcacgttccaggtctcgctcatacagcccacgacgatactaa
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