Salvelinus sp. IW2-2015 (Arctic char): 111955777
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Entry
111955777 CDS
T05762
Name
(RefSeq) syndetin-like
KO
K23288
syndetin
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111955777
Membrane trafficking [BR:
salp04131
]
Protein recycling
Others
EARP complex
111955777
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
Motif
Other DBs
NCBI-GeneID:
111955777
NCBI-ProteinID:
XP_023990493
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Position
LG31:complement(26451750..26774053)
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AA seq
683 aa
AA seq
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MADLSLVENFRISSNEELREMREQPIDPQAEQEIINNIQEVYYSDDSFDMVQHELEELER
VTSLQTNLQLAAVICANTRRQLSVSKQDFTEASLGLLANQRRRQLLTGLLKPLRTIKTLR
RTDVRLSEMLEEQLDVALSKTCKHFDVSHYTRVQLAYTVLGKSQTAMDQVHMHFTQAIHN
TVFQVVLGYVELCVGTPTPSSRRCNETGAADTAEAVVDHSYVKKKLEHGPTRIWQEVQLK
VKAYLLGTDMSNFKYDDFIVVLDVISRLMQVGEEFCGRPGSPVSFFELFSQEGNPFERHI
DNKDGETEDVLASNGCESDELEKSVYQDYDSDSDVPDELQQDFVDEQTGDIPLKSPSRET
LRSRKKSDYSLNKGANAPILTNTTLNVIRLLFDYYLYAVYTFFRRNDMESLGEGGSSIQG
GPVEERKEKVHSPHLSQLVVLTASETLYGLAQRVVTTESLVFLAKQFQFLRSHLDTMMPA
AKKPFIQQFYSQTVSPASELRKPICWVVAAKALDHEQMLLLMAXVKWDIREIMSQHNVDV
LMKFEEFNKRLGDVSRHVRVPLPVSNILWEHCICLANRTLVEGYGNVKKCSNEGRALMQL
DFQQFLMKLEKLTMRPIPDKDFVETYIKVYYLTENDMEQFIKNHRYSMKQLANLVNMCLG
SHINKXARQXLLAAIDDIDRPXR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcagacctcagccttgtggagaacttcaggatctcaagcaatgaggagttgagggag
atgagggagcagcccatcgacccccaggcagagcaggagatcattaacaacatccaggag
gtctactactctgacgactccttcgacatggtgcagcacgagctggaggagttagagagg
gtgacatcattacaaaccaacctacagctggctgcagtaatctgcgccaacactaggagg
cagctgagtgtttccaagcaggacttcactgaggccagcctggggctcctagccaatcag
aggaggagacagctgctcacagggctactgaagccactgaggaccatcaagaccctgcga
aggactgatgttagactcagtgagatgctggaggagcagctggatgtggccctgtccaaa
acctgcaagcactttgacgtctcccactacaccagagttcagctggcgtacaccgtcctg
ggaaagagccagacggccatggaccaagtccacatgcacttcacccaggccattcacaac
actgtgttccaggtggttctgggatacgtggagctctgcgtaggcacaccgacaccaagt
tccagaagatgcaatgagacgggtgccgcagacactgcagaggcggttgttgaccacagc
tatgtgaagaagaagctggaacacggccccactcgaatctggcaggaagtgcagctgaaa
gtgaaagcttatctgcttgggaccgacatgtccaacttcaaatacgatgacttcattgtg
gtcctggatgttatcagcaggctgatgcaagtgggggaggagttctgtggcagaccagga
agtcctgtctcttttttcgagctcttcagccaggaggggaacccctttgagaggcacatc
gacaacaaggatggggagactgaggacgtgctggcctccaatgggtgtgagtcagatgag
ctggagaagagcgtctaccaggactacgacagtgacagtgacgtccctgatgaactccag
caggacttcgtggacgagcagaccggagacatccctctcaagagcccgtcaagggagacg
ctgcgcagcaggaagaagtcggactacagccttaacaagggcgccaatgctcccatcctg
accaacacaaccctcaacgtgattcgcctgctgtttgattactacctgtatgctgtctac
accttcttccgccgcaacgatatggagtctctgggggaaggcggatccagcatccagggt
ggcccagtggaggagaggaaggagaaggtgcacagccctcacctcagccagctggttgtt
ctgacagccagtgagacactctacggcctggcccagagggtggtcaccacagagtcactg
gtgtttctggccaagcagtttcagttccttcggtctcacctggatactatgatgcctgca
gccaagaagccgttcatccagcagttctactcacagactgtctccccggccagtgagcta
cgtaaacccatatgctgggtcgtggcggccaaggctttagaccacgaacagatgctgctg
ctgatggctgsagttaagtgggacattagggagataatgtcgcagcacaatgtggacgtc
ctgatgaagtttgaggagtttaacaagaggctgggtgatgtgtccagacacgtccgggtc
cccctgcctgtgtctaacatcctgtgggaacactgcatctgtctggccaacaggactctg
gtggagggctatggtaacgtaaagaagtgcagtaatgaagggcgggctctgatgcagctg
gacttccagcagttcctgatgaagctggagaagctgactatgaggccaatccctgacaag
gactttgtggagacctacatcaaggtctactacctgactgagaatgacatggagcagttt
atcaagaaccacaggtactccatgaagcagctggccaacctggtgaacatgtgtctgggc
tctcacattaacaagrmggcccggcagaawctcctggcagccatcgacgacatygacaga
ccaawgcgatag
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