Salvelinus sp. IW2-2015 (Arctic char): 111955815
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Entry
111955815 CDS
T05762
Name
(RefSeq) GA-binding protein subunit beta-2 isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111955815
03029 Mitochondrial biogenesis [BR:
salp03029
]
111955815
Transcription factors [BR:
salp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
111955815
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
111955815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ank_KRIT1
ANK_LRRK2
TC1
Motif
Other DBs
NCBI-GeneID:
111955815
NCBI-ProteinID:
XP_023831900
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Position
LG31:complement(11387936..11399537)
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AA seq
402 aa
AA seq
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MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQHGHYSTAEVLLRA
GVSRDARTKVDRTPLHMAASEGHNVIVDLLVRSGADINAKDMLKMTALHWAAQNGHQRVA
ETLVKHGADVHALSKFDKTPFDIAGDIQNADLMLLLQEGMQNQVNMNAEAGMTGSSAQPQ
FIIQGIPGLPGGVVNLADLLNNINSAGDSEEAIAANSLDPGSIQHMVNEQGQRVITIVTD
QHGNLQTGGLGQPFFVTMQHGQQMLAMPANQVTEEVVEEEPQPPPARKRKLEASANHMES
GDTEQLQRQLQEANRKAQEYRQQLMCKEQEAEQYRMKLEAMSHSHTNGTLEQEEVVEEEE
EEEEEVVLLQEGDIIIKTEELDSAEEQVTLVESVPSHTEVIS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggtggatttggggaagcggctccttgaggccgcacgsaaaggccaggacgat
gaagtcaggacactcatggccaatggggctcccttcaccacagactggctgggcacatct
ccgttgcacctggccgcccaacacggacactattccaccgccgaggtgctgctcagggca
ggcgtcagcagagatgcccgaaccaaagtggacaggacccctctgcacatggctgcttca
gagggccacaacgtcatcgtggatctattagtcaggagtggcgcagacattaatgccaaa
gacatgctgaagatgactgctctccactgggccgcccagaatggccaccaaagggtagca
gagacgcttgtcaaacatggcgccgatgttcacgctctcagtaaatttgataagacgccg
tttgacatcgcaggagacatccagaatgcagaccttatgctcctactacaggagggaatg
cagaaccaggtgaacatgaacgcagaggctggcatgacggggagctcggcccagcctcag
tttatcatccagggcatcccagggctcccggggggtgtggtcaacctggcggatctcctc
aacaacatcaactcggcaggtgactcggaggaagccatagcagccaattctttggacccc
ggcagcatccagcacatggtgaacgagcaaggtcaaagggttatcaccatagtgaccgac
caacacggtaacctgcagactggagggcttggtcagccattcttcgtcaccatgcagcat
ggacaacagatgttggcgatgccagccaatcaggtgacagaggaggtggttgaggaggaa
ccccagcccccgcctgcccgcaagaggaaactcgaggcctcggccaaccacatggagtct
ggagacacggagcagttacagaggcagctgcaggaggccaaccggaaagcccaggagtac
cggcagcagctgatgtgcaaagagcaggaagcagagcagtaccgtatgaagctggaggcc
atgtcgcacagccataccaacggcaccttggagcaggaggaagtggttgaggaggaggag
gaggaggaggaggaggtggtgctgctccaggagggagacatcatcatcaagacggaggag
ctggactcggccgaggagcaggtgacgctggtggagtcggtgccctcccacaccgaggtc
atctcataa
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